Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 Y_RNA.187-201ENST00000363918 113 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 SNORA3A-201ENST00000364113 130 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 RNU6-308P-201ENST00000390957 107 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 MIR1302-11-201ENST00000408051 138 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 MIR1302-9-201ENST00000408365 138 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 MIR1302-10-201ENST00000408734 138 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 RNU6-293P-201ENST00000411259 106 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AC138623.1-201ENST00000418060 216 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AC005534.2-201ENST00000431047 433 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.56□□□□□ -2
ABCF3Q9NUQ8 PCMTD1P1-201ENST00000455560 355 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AC090515.1-201ENST00000465295 476 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 MED28P2-201ENST00000475771 317 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AL049873.1-201ENST00000480540 376 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AK3P2-201ENST00000507976 429 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AC097473.1-201ENST00000508142 408 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.56□□□□□ -2
ABCF3Q9NUQ8 SCARNA15.1-201ENST00000516384 125 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.56□□□□□ -2
ABCF3Q9NUQ8 MIR4319-201ENST00000577285 85 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.56□□□□□ -2
ABCF3Q9NUQ8 MIR1302-2-201ENST00000607096 138 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.56□□□□□ -2
ABCF3Q9NUQ8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.55□□□□□ -2
ABCF3Q9NUQ8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ABCF3Q9NUQ8 RNU6-1115P-201ENST00000362490 106 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 Y_RNA.146-201ENST00000363549 102 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 Y_RNA.326-201ENST00000365176 113 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 RNU6-790P-201ENST00000384479 105 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 SNORA80E-201ENST00000384744 137 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 MIR548P-201ENST00000408336 84 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
ABCF3Q9NUQ8 NUP35P1-201ENST00000422734 947 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 DAP3P1-201ENST00000441522 278 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 AL161788.1-201ENST00000441805 169 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.55□□□□□ -2
ABCF3Q9NUQ8 AC006026.2-201ENST00000457376 180 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 RNU6-1037P-201ENST00000459571 107 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 RPS29P27-201ENST00000463711 170 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 RPL9P9-202ENST00000466501 579 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 FO393415.2-201ENST00000480085 343 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 AC068781.1-201ENST00000488231 618 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.55□□□□□ -2
ABCF3Q9NUQ8 RNU6-377P-201ENST00000515965 102 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 RNU6-1170P-201ENST00000515974 106 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 AC109479.2-201ENST00000517842 174 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.55□□□□□ -2
ABCF3Q9NUQ8 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 AC121758.2-201ENST00000553271 193 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 MYL12BP1-201ENST00000569826 507 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 MIR3171-201ENST00000584270 74 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 PISRT1.1-201ENST00000616930 107 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 AC008121.3-201ENST00000618726 433 ntBASIC2.55□□□□□ -2
ABCF3Q9NUQ8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 Y_RNA.48-201ENST00000362710 103 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 RNU6-859P-201ENST00000362728 107 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 Y_RNA.395-201ENST00000383945 109 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 RNU6-1040P-201ENST00000383974 107 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 SNORD116-20-201ENST00000384529 92 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 MIR559-201ENST00000385188 96 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 SNORA75.6-201ENST00000391318 127 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 RPS29P13-201ENST00000402041 169 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 RNU6-174P-201ENST00000410406 106 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 RNA5SP270-201ENST00000411361 118 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 MTND3P9-201ENST00000429526 346 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 RPS15AP10-201ENST00000432472 382 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 AL118496.2-201ENST00000448300 230 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 AC107222.1-201ENST00000510899 637 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 RNA5SP356-201ENST00000515972 94 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 SNRPGP17-201ENST00000603780 214 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 uc_338.22-201ENST00000622722 187 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 AC134503.1-201ENST00000633048 54 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
ABCF3Q9NUQ8 MTND5P10-201ENST00000603719 1809 ntBASIC2.54□□□□□ -2
ABCF3Q9NUQ8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
ABCF3Q9NUQ8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ABCF3Q9NUQ8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ABCF3Q9NUQ8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
ABCF3Q9NUQ8 Y_RNA.2-201ENST00000362330 96 ntBASIC2.53□□□□□ -2
ABCF3Q9NUQ8 Y_RNA.197-201ENST00000364004 102 ntBASIC2.53□□□□□ -2
ABCF3Q9NUQ8 RNU1-148P-201ENST00000384472 162 ntBASIC2.53□□□□□ -2
ABCF3Q9NUQ8 RNU6-692P-201ENST00000384496 107 ntBASIC2.53□□□□□ -2
ABCF3Q9NUQ8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ABCF3Q9NUQ8 PMCHL1-202ENST00000423102 261 ntBASIC2.53□□□□□ -2
ABCF3Q9NUQ8 USMG5P1-201ENST00000425964 177 ntBASIC2.53□□□□□ -2
ABCF3Q9NUQ8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms