Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNU6-1046P-201ENST00000516538 107 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 AC010620.2-201ENST00000600135 313 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 AL078596.1-201ENST00000624856 447 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 AC093831.2-201ENST00000624393 3427 ntBASIC3.15□□□□□ -1.9
CCM2LQ9NUG4 RNU1-76P-201ENST00000362903 159 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.152-201ENST00000363578 100 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 RNU6-280P-201ENST00000364145 104 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 RNY3P4-201ENST00000384428 101 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 MIR320B2-201ENST00000408479 138 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 CYCSP4-201ENST00000429682 331 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 RN7SL283P-201ENST00000489055 303 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 SNORA70.18-201ENST00000516696 98 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.715-201ENST00000517082 110 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 RNU6-58P-201ENST00000517143 103 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 AC022868.1-201ENST00000517767 391 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 AL117187.1-201ENST00000555482 181 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 RPL30P11-203ENST00000598995 310 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.15□□□□□ -1.91
CCM2LQ9NUG4 AC069528.2-201ENST00000624849 1991 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 MIR29B2-201ENST00000385055 81 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 RNU6-159P-201ENST00000391080 106 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 RNU6-1093P-201ENST00000391194 107 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AL356057.3-201ENST00000402607 340 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 MIR1252-201ENST00000408861 65 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 DPH3P2-201ENST00000422618 250 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 EIF1P2-201ENST00000428233 350 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 CST9LP2-201ENST00000437612 320 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 MTND3P2-201ENST00000438452 342 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 RPS15AP7-201ENST00000439294 405 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AC096638.1-201ENST00000444678 216 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AC145146.1-201ENST00000496370 254 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 SCARNA3-201ENST00000517097 143 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AP002770.2-201ENST00000543613 532 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 MIR3199-1-201ENST00000582434 88 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCM2LQ9NUG4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 RNU4-15P-201ENST00000362613 141 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.153-201ENST00000363615 91 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 U3.9-201ENST00000363823 204 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.551-201ENST00000384661 102 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 MIR10B-201ENST00000385011 110 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 SNORA46.1-201ENST00000391069 153 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 MIR548F4-201ENST00000408515 105 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AL358176.2-201ENST00000425769 204 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 RPL30P4-201ENST00000429309 333 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 RPS12P18-201ENST00000442381 270 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 U8.22-201ENST00000459141 133 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AC073901.1-201ENST00000462471 408 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AC007215.1-201ENST00000464893 276 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AC034114.1-201ENST00000520293 285 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 MIR5695-201ENST00000579717 85 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AL021879.1-201ENST00000611756 288 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCM2LQ9NUG4 RNU6-1309P-201ENST00000363305 108 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 RNU6-879P-201ENST00000364328 108 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 RNU6-1105P-201ENST00000384774 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms