Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AC025754.2-201ENST00000606491 432 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AC004492.1-201ENST00000607036 742 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AC064807.4-201ENST00000607201 407 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.500-201ENST00000384466 111 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 RNU2-41P-201ENST00000410991 178 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 EIF1AXP1-201ENST00000419267 435 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC012306.1-201ENST00000423267 114 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 MTND3P21-201ENST00000433774 331 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 U8.21-201ENST00000459536 136 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC010486.1-201ENST00000511793 424 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC016256.1-201ENST00000547971 354 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 SCOCP1-201ENST00000554676 349 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC100830.2-201ENST00000581636 240 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 CYP2C61P-201ENST00000604072 290 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC009994.1-201ENST00000606889 253 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC097065.2-201ENST00000608159 533 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC087241.4-201ENST00000612441 480 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 DISC2.1-201ENST00000612827 205 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 AC099654.12-201ENST00000639868 649 ntBASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ZCCHC3Q9NUD5 RNA5SP493-201ENST00000364115 91 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-1317P-201ENST00000364582 104 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.436-201ENST00000384097 102 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-214P-201ENST00000384130 107 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 MIR676-201ENST00000390702 67 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 MTCO3P41-201ENST00000414801 328 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 EIF4EP2-201ENST00000422816 654 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 UBE2V1P4-201ENST00000425374 344 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 MRPS10P2-201ENST00000431226 381 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AL035666.1-201ENST00000446195 348 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 RPL23AP6-201ENST00000446637 472 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC083904.1-201ENST00000487828 231 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC114801.2-201ENST00000503825 781 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 ATP5EP1-201ENST00000510257 156 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-506P-201ENST00000516553 94 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC245505.1-201ENST00000556398 224 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 MIR3169-201ENST00000578032 83 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC005296.1-201ENST00000616145 209 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 U1.36-201ENST00000620684 176 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 FER-210ENST00000628534 558 ntTSL 5 BASIC1.84□□□□□ -2.11
ZCCHC3Q9NUD5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ZCCHC3Q9NUD5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 SNORD114-6-201ENST00000364393 72 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 RNA5SP212-201ENST00000391223 107 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 MIR208B-201ENST00000401172 77 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 AC123900.1-201ENST00000420390 96 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 MTCO1P20-201ENST00000425366 358 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 MTND3P9-201ENST00000429526 346 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 AMD1P1-201ENST00000457220 922 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 AC010525.2-201ENST00000590920 195 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 RPL17P51-201ENST00000605218 238 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 AC015540.1-201ENST00000615828 501 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 AL590240.4-201ENST00000616908 390 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 DUXAP9-208ENST00000622815 614 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 MIR1321-201ENST00000637766 79 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 LINC02555-201ENST00000563933 1951 ntBASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
ZCCHC3Q9NUD5 RNU1-76P-201ENST00000362903 159 ntBASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 RNY3P3-201ENST00000363816 102 ntBASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 RNU1-131P-201ENST00000458943 161 ntBASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-1332P-201ENST00000516666 104 ntBASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 RNU6-1098P-201ENST00000516772 96 ntBASIC1.82□□□□□ -2.12
ZCCHC3Q9NUD5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms