Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AL020997.3-201ENST00000602843 359 ntBASIC-1.03□□□□□ -2.57
SMCO4Q9NRQ5 AC007363.1-201ENST00000604736 620 ntBASIC-1.03□□□□□ -2.57
SMCO4Q9NRQ5 AC016252.1-201ENST00000609721 474 ntBASIC-1.03□□□□□ -2.57
SMCO4Q9NRQ5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-1.03□□□□□ -2.57
SMCO4Q9NRQ5 RNU6-212P-201ENST00000362642 104 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-1099P-201ENST00000363533 107 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 Y_RNA.185-201ENST00000363894 100 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 RNU4-76P-201ENST00000364509 141 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 RNA5SP300-201ENST00000391197 107 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 Z99497.1-201ENST00000421282 135 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 AC060773.1-201ENST00000421698 310 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 AC016925.1-201ENST00000458303 298 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 RNU7-159P-201ENST00000459284 62 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-491P-201ENST00000516099 110 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 AC091163.3-201ENST00000518269 1144 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 AK6P2-201ENST00000549020 471 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 AC090049.2-201ENST00000550377 109 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 TPRKBP2-201ENST00000565969 475 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 AL929325.1-201ENST00000603096 117 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 AL034555.1-201ENST00000604816 211 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-94P-201ENST00000607728 107 ntBASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-1.04□□□□□ -2.58
SMCO4Q9NRQ5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-679P-201ENST00000391003 106 ntBASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 SNORA75.6-201ENST00000391318 127 ntBASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-994P-201ENST00000410507 111 ntBASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 MTCO3P28-201ENST00000513351 515 ntBASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 MTND2P7-201ENST00000521337 640 ntBASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 AC011921.3-201ENST00000605540 361 ntBASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 TUG1_2.1-201ENST00000614234 87 ntBASIC-1.05□□□□□ -2.58
SMCO4Q9NRQ5 MTND4P4-201ENST00000439033 1366 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 SNORA25.3-201ENST00000363205 127 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 Y_RNA.226-201ENST00000364337 114 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-127P-201ENST00000390897 107 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 MIR892B-201ENST00000401279 77 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 AL603865.2-201ENST00000401679 213 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 MTCO3P41-201ENST00000414801 328 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 MTND4P19-201ENST00000446659 478 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 AC091021.1-201ENST00000468051 388 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 MIR449C-201ENST00000516047 92 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 Y_RNA.696-201ENST00000516725 107 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 AF038458.1-201ENST00000588406 262 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 AC240442.1-201ENST00000616055 283 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 AL591926.4-201ENST00000616895 298 ntBASIC-1.06□□□□□ -2.58
SMCO4Q9NRQ5 PCNPP3-201ENST00000393579 471 ntBASIC-1.07□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-284P-201ENST00000411105 106 ntBASIC-1.07□□□□□ -2.58
SMCO4Q9NRQ5 RPS29P8-201ENST00000445109 171 ntBASIC-1.07□□□□□ -2.58
SMCO4Q9NRQ5 AC026782.1-201ENST00000512952 449 ntBASIC-1.07□□□□□ -2.58
SMCO4Q9NRQ5 AP002001.1-203ENST00000534002 267 ntBASIC-1.07□□□□□ -2.58
SMCO4Q9NRQ5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-1.07□□□□□ -2.58
SMCO4Q9NRQ5 SEPT14P17-201ENST00000617978 177 ntBASIC-1.07□□□□□ -2.58
SMCO4Q9NRQ5 uc_338.16-201ENST00000621804 95 ntBASIC-1.07□□□□□ -2.58
SMCO4Q9NRQ5 RNA5SP432-201ENST00000362480 116 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 Y_RNA.85-201ENST00000363014 111 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 SNORA72.2-201ENST00000365028 127 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-622P-201ENST00000384272 103 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 FCF1P10-201ENST00000407590 479 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-77P-201ENST00000410554 91 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 MTCO3P45-201ENST00000443036 613 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 AC022868.1-201ENST00000517767 391 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 AC005730.3-201ENST00000583067 366 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 AL390208.1-201ENST00000605885 644 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 AL109933.3-201ENST00000619095 188 ntBASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-1.08□□□□□ -2.58
SMCO4Q9NRQ5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 Y_RNA.36-201ENST00000362602 112 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 RNU6-492P-201ENST00000363035 104 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 Y_RNA.280-201ENST00000364765 112 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 SNORA8.3-201ENST00000384679 139 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 RPL17P35-201ENST00000432217 549 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 MTND4LP16-201ENST00000440828 295 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 AC026371.1-201ENST00000551867 419 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 AP001180.6-201ENST00000584918 159 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 AC008147.4-201ENST00000617570 1204 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 AL356094.1-201ENST00000624663 1212 ntBASIC-1.09□□□□□ -2.58
SMCO4Q9NRQ5 Y_RNA.115-201ENST00000363272 98 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 RNU6-512P-201ENST00000364438 103 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 SNORD83.1-201ENST00000411362 77 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 TPMTP2-201ENST00000414372 726 ntBASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC-1.1□□□□□ -2.59
SMCO4Q9NRQ5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms