Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AIG1P1-201ENST00000503376 148 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 AC114801.2-201ENST00000503825 781 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 AC022493.2-201ENST00000506122 481 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 SMURF2P1-201ENST00000514992 481 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 RNU6-470P-201ENST00000515954 104 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 RPPH1-2P-201ENST00000516688 293 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 AC010186.2-204ENST00000537668 439 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 MIR5696-201ENST00000578474 85 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 AC005899.2-201ENST00000584353 90 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 Y_RNA.812-201ENST00000610788 101 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 Y_RNA.784-201ENST00000613803 101 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 Y_RNA.787-201ENST00000616522 101 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 Y_RNA.780-201ENST00000617336 101 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 Y_RNA.801-201ENST00000619005 101 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 AC091925.1-201ENST00000623204 462 ntBASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SLC52A3Q9NQ40 AL109809.4-201ENST00000603520 2185 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RBBP8P1-201ENST00000449447 1844 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RNU6-858P-201ENST00000362436 107 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 Y_RNA.48-201ENST00000362710 103 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RNU6-486P-201ENST00000363116 107 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 VTRNA1-1-201ENST00000363120 99 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RNU6-784P-201ENST00000384330 106 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 Y_RNA.533-201ENST00000384596 114 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 MIR196B-201ENST00000384852 84 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RNU6-1328P-201ENST00000410938 106 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RPL23AP95-201ENST00000426806 265 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 AL591043.1-201ENST00000432461 424 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RNA5SP112-201ENST00000515937 99 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 RNU6-307P-201ENST00000516743 106 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 SCARNA3-201ENST00000517097 143 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 AC090897.2-201ENST00000581715 130 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 MIR4765-201ENST00000585007 77 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 MIR3529-201ENST00000637713 78 ntBASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
SLC52A3Q9NQ40 AC080128.1-201ENST00000474389 1917 ntBASIC2.34□□□□□ -2.04
SLC52A3Q9NQ40 AC135776.4-201ENST00000624300 1904 ntBASIC2.34□□□□□ -2.04
SLC52A3Q9NQ40 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC52A3Q9NQ40 MTND4P27-201ENST00000450813 1354 ntBASIC2.34□□□□□ -2.04
SLC52A3Q9NQ40 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC016717.2-201ENST00000609089 5141 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC062016.1-201ENST00000355719 319 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 Y_RNA.252-201ENST00000364556 101 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 SNORA22B-201ENST00000383876 138 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 MIR27B-201ENST00000385129 97 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC004383.1-201ENST00000438135 289 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AL118496.2-201ENST00000448300 230 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC080013.2-201ENST00000460866 323 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AL163540.1-201ENST00000485382 386 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC090096.1-201ENST00000489168 390 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 RPL22P13-201ENST00000493291 347 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC107222.1-201ENST00000510899 637 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC091874.1-201ENST00000511402 339 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-699P-201ENST00000517081 110 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 SUB1P3-201ENST00000564581 315 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 MIR5701-3-201ENST00000578890 82 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 MIR4435-1-201ENST00000582552 80 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 MIR5701-1-201ENST00000585138 82 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 AC067747.1-201ENST00000608026 250 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 MIR5701-2-201ENST00000615634 82 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 HMGB1P24-202ENST00000615653 685 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 MTND5P9-201ENST00000503854 1755 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 ZNF299P-201ENST00000406845 1804 ntBASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SLC52A3Q9NQ40 RNU6-490P-201ENST00000362985 107 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 Y_RNA.123-201ENST00000363338 102 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 Y_RNA.148-201ENST00000363557 117 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 MRPS18CP6-201ENST00000423587 223 ntBASIC2.32□□□□□ -2.04
SLC52A3Q9NQ40 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms