Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MIR3923-201ENST00000579521 83 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.31□□□□□ -1.88
VTA1Q9NP79 AL360085.1-201ENST00000604713 532 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 AC005520.5-201ENST00000613926 164 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 SNORD98-201ENST00000636377 67 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 AL450472.1-202ENST00000637286 180 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTA1Q9NP79 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VTA1Q9NP79 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VTA1Q9NP79 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTA1Q9NP79 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
VTA1Q9NP79 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VTA1Q9NP79 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
VTA1Q9NP79 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VTA1Q9NP79 SNORA63C-201ENST00000364578 129 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AL133475.1-201ENST00000404414 305 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 RNA5SP274-201ENST00000410484 108 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 RNA5SP184-201ENST00000411071 108 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.3□□□□□ -1.88
VTA1Q9NP79 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.3□□□□□ -1.88
VTA1Q9NP79 AC112492.4-201ENST00000456549 352 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.3□□□□□ -1.88
VTA1Q9NP79 AC112771.1-201ENST00000463581 102 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AF186996.7-201ENST00000492781 209 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 ANXA2P1-201ENST00000505539 926 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.3□□□□□ -1.88
VTA1Q9NP79 RNU5F-2P-201ENST00000516066 82 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AC022616.4-201ENST00000522985 181 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VTA1Q9NP79 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.3□□□□□ -1.88
VTA1Q9NP79 MIR4506-201ENST00000584693 77 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AC008739.2-201ENST00000597006 317 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AL356575.1-201ENST00000603008 283 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 AC087588.2-201ENST00000617667 426 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 Z75746.1-201ENST00000440243 2080 ntBASIC3.3□□□□□ -1.88
VTA1Q9NP79 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VTA1Q9NP79 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VTA1Q9NP79 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.3□□□□□ -1.88
VTA1Q9NP79 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VTA1Q9NP79 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.29□□□□□ -1.88
VTA1Q9NP79 AC062016.1-201ENST00000355719 319 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 SNORA63.7-201ENST00000365579 123 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 Y_RNA.424-201ENST00000384063 103 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 RNU6-985P-201ENST00000410182 104 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 Y_RNA.592-201ENST00000410274 109 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 MTND2P23-201ENST00000422990 651 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AIMP1P2-201ENST00000425294 312 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AC087499.2-201ENST00000432861 149 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.29□□□□□ -1.88
VTA1Q9NP79 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.29□□□□□ -1.88
VTA1Q9NP79 RPS3P1-201ENST00000456781 192 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AC090525.1-201ENST00000479116 478 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 MRPS36P2-201ENST00000512569 299 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AC090617.3-201ENST00000573670 475 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AC103810.1-201ENST00000579873 453 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AC010928.2-201ENST00000588017 287 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 Z98751.3-201ENST00000604447 521 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AL034555.1-201ENST00000604816 211 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 MIR1244-1-201ENST00000612829 85 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 U2.1-201ENST00000618978 145 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 AC138305.3-201ENST00000624988 240 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 MIR1244-3-201ENST00000635744 85 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 MIR1244-2-201ENST00000636449 85 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 MIR1244-4-202ENST00000636813 85 ntBASIC3.29□□□□□ -1.88
VTA1Q9NP79 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.29□□□□□ -1.88
VTA1Q9NP79 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VTA1Q9NP79 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.29□□□□□ -1.88
VTA1Q9NP79 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
VTA1Q9NP79 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VTA1Q9NP79 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 SNORA68.1-201ENST00000364537 132 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 Y_RNA.380-201ENST00000365663 111 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 MIR628-201ENST00000385229 95 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 AC114482.1-201ENST00000418010 247 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 AL160004.2-201ENST00000432935 350 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 AL121594.1-201ENST00000475906 575 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 SNORA31.6-201ENST00000516241 130 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 HSBP1P1-201ENST00000555205 166 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 AC002064.3-201ENST00000623448 346 ntBASIC3.28□□□□□ -1.88
VTA1Q9NP79 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VTA1Q9NP79 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
VTA1Q9NP79 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VTA1Q9NP79 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VTA1Q9NP79 FAM35CP-201ENST00000554755 2470 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VTA1Q9NP79 MIR449A-201ENST00000362113 91 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 SNORD14.1-201ENST00000365609 90 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 MIR32-201ENST00000384965 70 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 RNU6-101P-201ENST00000410323 104 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 RN7SKP123-201ENST00000410732 291 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
VTA1Q9NP79 EIF4EP4-201ENST00000424916 578 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms