Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-1154P-201ENST00000391001 104 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 AC010401.1-201ENST00000463867 348 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 RPL23AP70-201ENST00000483361 460 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 AC231760.1-201ENST00000498002 260 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 RNU6-62P-201ENST00000516526 102 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 RNU6-579P-201ENST00000516879 102 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 AC136628.3-201ENST00000521868 290 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 AC091895.1-201ENST00000624494 256 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 AL672296.1-201ENST00000427780 2158 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 AC004944.1-201ENST00000517807 3059 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSU72Q9NP77 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSU72Q9NP77 SNORD115-30-201ENST00000364117 82 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 RNU6-151P-201ENST00000364158 107 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 RNU4-10P-201ENST00000364383 140 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 SNORA40.19-201ENST00000390846 128 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 MIR937-201ENST00000401271 86 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.69□□□□□ -1.82
SSU72Q9NP77 snoU13.14-201ENST00000459372 104 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 RPL31P41-201ENST00000477967 372 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.69□□□□□ -1.82
SSU72Q9NP77 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 AC021269.2-201ENST00000532318 330 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
SSU72Q9NP77 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
SSU72Q9NP77 AC090616.3-201ENST00000582184 217 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 AC011471.1-201ENST00000585766 187 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 RPS15AP11-201ENST00000594193 385 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 AC006380.1-201ENST00000603598 186 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 AC069200.1-201ENST00000609511 323 ntBASIC3.69□□□□□ -1.82
SSU72Q9NP77 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.69□□□□□ -1.82
SSU72Q9NP77 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSU72Q9NP77 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSU72Q9NP77 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSU72Q9NP77 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.69□□□□□ -1.82
SSU72Q9NP77 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SSU72Q9NP77 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSU72Q9NP77 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSU72Q9NP77 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSU72Q9NP77 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSU72Q9NP77 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 RNU1-75P-201ENST00000347264 129 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 SNORA58B-201ENST00000364259 136 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 Y_RNA.357-201ENST00000365487 109 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 SNORA67.2-201ENST00000384300 149 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 RNU6-239P-201ENST00000390990 99 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 PTGES3P4-201ENST00000426243 356 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 RPL23AP82-202ENST00000427528 469 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 AC105137.1-201ENST00000484355 562 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 AC010409.1-201ENST00000487382 476 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 RNU6-313P-201ENST00000516317 112 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.68□□□□□ -1.82
SSU72Q9NP77 AL162713.1-201ENST00000604480 262 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 AC013791.1-201ENST00000616619 62 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSU72Q9NP77 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSU72Q9NP77 AC068647.1-201ENST00000489539 2265 ntBASIC3.68□□□□□ -1.82
SSU72Q9NP77 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.67□□□□□ -1.82
SSU72Q9NP77 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSU72Q9NP77 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SSU72Q9NP77 RN7SKP103-201ENST00000363848 320 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 RNU6-324P-201ENST00000363957 106 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 Y_RNA.243-201ENST00000364481 109 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 U1.1-201ENST00000384101 164 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 RNU6-748P-201ENST00000384648 107 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 Y_RNA.572-201ENST00000384757 98 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 MIR192-201ENST00000384915 110 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SSU72Q9NP77 AL031003.1-201ENST00000404229 172 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 AL591034.1-201ENST00000407447 340 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 AC027124.2-201ENST00000428249 105 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SSU72Q9NP77 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.67□□□□□ -1.82
SSU72Q9NP77 AC021205.2-201ENST00000480069 347 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.67□□□□□ -1.82
SSU72Q9NP77 RNU1-61P-201ENST00000516107 151 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 RNU6-344P-201ENST00000516635 111 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 SNORD19.2-201ENST00000516978 73 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 AC022149.2-201ENST00000621061 203 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 MIR7153-201ENST00000637758 57 ntBASIC3.67□□□□□ -1.82
SSU72Q9NP77 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSU72Q9NP77 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
SSU72Q9NP77 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.67□□□□□ -1.82
SSU72Q9NP77 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSU72Q9NP77 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms