Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MTCO3P29-201ENST00000432119 779 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 Z82188.1-201ENST00000436709 154 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 AL353752.1-201ENST00000454946 260 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 AC112492.4-201ENST00000456549 352 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 RPL23AP75-201ENST00000491601 451 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 RNU6-475P-201ENST00000516073 104 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 GNAI2P1-201ENST00000541815 315 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 AC104581.2-201ENST00000572227 430 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 MIR5571-201ENST00000577998 113 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 AC008739.2-201ENST00000597006 317 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 AC008737.2-201ENST00000599446 118 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 AC136443.5-201ENST00000603741 370 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 RPL23AP88-201ENST00000605759 454 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 AC091812.1-201ENST00000432235 1948 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC005592.1-201ENST00000566527 1640 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC233981.2-201ENST00000611524 1614 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RNU5B-2P-201ENST00000363036 113 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RNY3P11-201ENST00000364153 102 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RNU6-968P-201ENST00000384076 107 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 SNORA29-201ENST00000384183 140 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AL512633.1-201ENST00000399931 655 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AL133475.1-201ENST00000404414 305 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RN7SKP284-201ENST00000411002 343 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC063976.3-201ENST00000426849 329 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RPL23AP58-201ENST00000440453 469 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RPL39P29-201ENST00000447779 157 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC107626.1-201ENST00000471084 183 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RPL30P12-201ENST00000474666 353 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RN7SL429P-201ENST00000479090 223 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RN7SL489P-201ENST00000486185 223 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RN7SL327P-201ENST00000488659 223 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AF186996.7-201ENST00000492781 209 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC104564.1-201ENST00000493028 407 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RNU6-1046P-201ENST00000516538 107 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC016256.1-201ENST00000547971 354 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 RN7SL853P-201ENST00000617250 223 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 UCA1.1-201ENST00000620952 75 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 SCARNA4-201ENST00000629045 128 ntBASIC2.87□□□□□ -1.95
USP29Q9HBJ7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.87□□□□□ -1.95
USP29Q9HBJ7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 RNU4-9P-201ENST00000364951 139 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.405-201ENST00000383979 100 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.451-201ENST00000384200 100 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.524-201ENST00000384564 100 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.561-201ENST00000384694 100 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 RNU6-700P-201ENST00000391043 107 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 SNORA26.3-201ENST00000391119 136 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 MTCYBP2-201ENST00000407745 171 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.86□□□□□ -1.95
USP29Q9HBJ7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AC078809.1-201ENST00000427601 140 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AC096644.2-201ENST00000429278 159 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AC104332.2-201ENST00000429959 156 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.86□□□□□ -1.95
USP29Q9HBJ7 RPS27AP9-201ENST00000477681 438 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 RPL31P41-201ENST00000477967 372 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 RN7SL297P-201ENST00000483161 293 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 RNU7-4P-201ENST00000516961 62 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.720-201ENST00000517166 92 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.86□□□□□ -1.95
USP29Q9HBJ7 HSPE1P4-201ENST00000550617 308 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.86□□□□□ -1.95
USP29Q9HBJ7 RPS15AP11-201ENST00000594193 385 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AL162373.1-201ENST00000620433 407 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 AC002064.3-201ENST00000623448 346 ntBASIC2.86□□□□□ -1.95
USP29Q9HBJ7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
USP29Q9HBJ7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.85□□□□□ -1.95
USP29Q9HBJ7 MIR625-201ENST00000385047 85 ntBASIC2.85□□□□□ -1.95
USP29Q9HBJ7 CYCSP48-201ENST00000417124 323 ntBASIC2.85□□□□□ -1.95
USP29Q9HBJ7 AC007098.1-201ENST00000420122 367 ntBASIC2.85□□□□□ -1.95
USP29Q9HBJ7 AC092423.1-201ENST00000430165 186 ntBASIC2.85□□□□□ -1.95
USP29Q9HBJ7 AC087499.2-201ENST00000432861 149 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms