Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU6-142P-201ENST00000384019 107 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 SNORA46.1-201ENST00000391069 153 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC009963.1-201ENST00000417265 157 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 EIF1P1-201ENST00000421436 341 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 RPS29P25-201ENST00000481709 171 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC104564.1-201ENST00000493028 407 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC069439.1-201ENST00000494739 167 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC022447.4-201ENST00000504053 364 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 RNU6-256P-201ENST00000516747 97 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 RNU6-1314P-201ENST00000517139 104 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC022616.8-201ENST00000533569 253 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 SCOCP1-201ENST00000554676 349 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC100830.2-201ENST00000581636 240 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 MIR3136-201ENST00000583498 78 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 Z98751.3-201ENST00000604447 521 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 AC084782.3-201ENST00000612282 578 ntBASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VIPAS39Q9H9C1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AC092268.1-201ENST00000342691 405 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 SNORA16B-201ENST00000364674 135 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 RNU6-378P-201ENST00000384324 107 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 RNU6-933P-201ENST00000384424 107 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 RNU6-790P-201ENST00000384479 105 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 MIR1277-201ENST00000408536 78 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 Y_RNA.599-201ENST00000410489 109 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 snoU13.6-201ENST00000458785 104 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 TRBVA-201ENST00000498804 316 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AC021146.2-201ENST00000504736 556 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AC096745.1-201ENST00000509945 370 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 MRPS36P4-201ENST00000534436 298 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 MIR3923-201ENST00000579521 83 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AC023043.2-201ENST00000589678 1026 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AL138726.1-201ENST00000614873 333 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AL132822.1-201ENST00000617063 513 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 MIR6852-201ENST00000621699 66 ntBASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.97□□□□□ -2.09
VIPAS39Q9H9C1 AP000560.1-201ENST00000624150 1937 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 Y_RNA.510-201ENST00000384511 114 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-831P-201ENST00000384548 107 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-95P-201ENST00000384697 107 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 SNORA11.4-201ENST00000408823 129 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 MTND1P11-201ENST00000456661 876 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 AC107032.1-201ENST00000485945 480 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 MTCO1P29-201ENST00000496868 288 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-991P-201ENST00000516168 107 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 MTND4LP26-201ENST00000518144 282 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 AC008749.1-201ENST00000597650 306 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 AL356157.2-201ENST00000605122 111 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 AC093913.1-201ENST00000614178 329 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 AC002553.4-201ENST00000616896 331 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 AL162373.1-201ENST00000620433 407 ntBASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.96□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-562P-201ENST00000362731 107 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-128P-201ENST00000383976 107 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 MIR208B-201ENST00000401172 77 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 MIR1262-201ENST00000408276 93 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 MIR1294-201ENST00000408503 142 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 AC009161.1-201ENST00000417306 376 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 NDUFA5P6-201ENST00000542110 379 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 AC078899.2-201ENST00000595282 212 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 AC025754.2-201ENST00000606491 432 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 AL136221.1-201ENST00000621449 509 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms