Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 WARS2P1-201ENST00000429678 537 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 USP9YP28-201ENST00000435142 589 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 MTCO3P18-201ENST00000440206 761 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AL137159.1-201ENST00000452808 512 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 RNU7-66P-201ENST00000459469 62 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 RPS29P27-201ENST00000463711 170 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.04□□□□□ -2.08
UBQLN3Q9H347 RNU6-1314P-201ENST00000517139 104 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AC018630.3-201ENST00000542637 96 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AC021231.3-201ENST00000558497 370 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AC109446.1-201ENST00000566172 220 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AC146944.4-201ENST00000602697 718 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 SNRPGP17-201ENST00000603780 214 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 Z98751.3-201ENST00000604447 521 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AC093913.1-201ENST00000614178 329 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.04□□□□□ -2.08
UBQLN3Q9H347 AC009033.1-201ENST00000624279 431 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 SNORA43.4-201ENST00000629559 138 ntBASIC2.04□□□□□ -2.08
UBQLN3Q9H347 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 U8.2-201ENST00000363156 134 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 Y_RNA.157-201ENST00000363638 102 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 RNU6-611P-201ENST00000384276 104 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 RNU6-790P-201ENST00000384479 105 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 SNORA26.3-201ENST00000391119 136 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 RNU2-48P-201ENST00000410694 191 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 AL590632.1-201ENST00000424289 371 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 RNU7-187P-201ENST00000458985 68 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 AC021146.2-201ENST00000504736 556 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 MIR3672-201ENST00000584290 82 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 MIR3976-201ENST00000606807 139 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 AL138726.1-201ENST00000614873 333 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 AL132822.1-201ENST00000617063 513 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 MIR1248-201ENST00000629190 106 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 AL450472.1-202ENST00000637286 180 ntBASIC2.03□□□□□ -2.08
UBQLN3Q9H347 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBQLN3Q9H347 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
UBQLN3Q9H347 RNU6-562P-201ENST00000362731 107 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 RNU6-1159P-201ENST00000362933 107 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 Y_RNA.151-201ENST00000363566 112 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
UBQLN3Q9H347 EIF1AXP1-201ENST00000419267 435 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 DPH3P2-201ENST00000422618 250 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 Z82205.1-201ENST00000428456 297 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AL645568.3-201ENST00000433683 316 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 NFU1P2-201ENST00000448700 469 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AL353705.4-201ENST00000449661 238 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 PRELID3BP1-201ENST00000457142 540 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 RPS29P25-201ENST00000481709 171 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.02□□□□□ -2.09
UBQLN3Q9H347 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 RNU6-567P-201ENST00000516746 107 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AC023043.2-201ENST00000589678 1026 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AC002553.4-201ENST00000616896 331 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
UBQLN3Q9H347 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
UBQLN3Q9H347 SNORD32B-201ENST00000364460 84 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
UBQLN3Q9H347 RNU6-378P-201ENST00000384324 107 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 SNORA51.11-201ENST00000384442 131 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 RNU6-95P-201ENST00000384697 107 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
UBQLN3Q9H347 MIR208B-201ENST00000401172 77 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 MTCYBP2-201ENST00000407745 171 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.01□□□□□ -2.09
UBQLN3Q9H347 AC012306.1-201ENST00000423267 114 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.01□□□□□ -2.09
UBQLN3Q9H347 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UBQLN3Q9H347 PCMTD1P1-201ENST00000455560 355 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 RPS27P21-201ENST00000486977 252 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 RPS29P21-201ENST00000496272 170 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.01□□□□□ -2.09
UBQLN3Q9H347 CYP4A27P-201ENST00000567218 190 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 CPDP1-201ENST00000579660 283 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 MIR3942-201ENST00000585264 109 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 AP000654.2-201ENST00000605633 586 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 MIR8076-201ENST00000611401 83 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
UBQLN3Q9H347 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.01□□□□□ -2.09
UBQLN3Q9H347 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms