Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AC011712.1-201ENST00000588959 234 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 VN1R107P-201ENST00000601784 209 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 AL138963.2-201ENST00000605137 226 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
ZNF541Q9H0D2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
ZNF541Q9H0D2 snoU2_19.1-201ENST00000362361 80 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 RNA5SP393-201ENST00000363423 117 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 Y_RNA.167-201ENST00000363735 109 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 RNU6-876P-201ENST00000391295 104 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 RPS29P13-201ENST00000402041 169 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 AC008267.5-201ENST00000424928 265 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 AC114801.2-201ENST00000503825 781 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 RNU6-612P-201ENST00000516909 102 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 RNU6-586P-201ENST00000517265 104 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 RNU1-104P-201ENST00000517280 175 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 AC091135.1-201ENST00000585943 307 ntBASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF541Q9H0D2 AC009541.1-201ENST00000438279 2662 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 RNU6-1317P-201ENST00000364582 104 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 RNA5SP125-201ENST00000364843 120 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 RNU6-43P-201ENST00000384302 107 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 Y_RNA.504-201ENST00000384481 104 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 MIR521-1-201ENST00000384902 87 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 RNU6-510P-201ENST00000391239 108 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AL627390.1-201ENST00000396055 340 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AP1B1P2-201ENST00000416196 106 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AC027124.2-201ENST00000428249 105 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 MTND3P9-201ENST00000429526 346 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AC244670.1-201ENST00000436879 112 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 snoU13.18-201ENST00000459483 104 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 RPL30P1-201ENST00000488676 339 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AC104564.1-201ENST00000493028 407 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 RNU6-358P-201ENST00000516564 75 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AC100830.2-201ENST00000581636 240 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.39□□□□□ -2.03
ZNF541Q9H0D2 MTND4P23-201ENST00000447723 1363 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 RNU6-562P-201ENST00000362731 107 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 RNU6-1141P-201ENST00000364520 107 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AL590135.1-201ENST00000422215 156 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC019205.3-201ENST00000424573 156 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 USP9YP8-201ENST00000441913 500 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC016700.2-201ENST00000446011 156 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AL121594.1-201ENST00000475906 575 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC015911.1-201ENST00000495111 156 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 MTCO1P29-201ENST00000496868 288 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 TRMT112P2-201ENST00000512910 132 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC093249.1-201ENST00000567049 203 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 MIR3683-201ENST00000580847 82 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC018638.8-201ENST00000588755 281 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC063943.3-201ENST00000615562 356 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 AC006504.8-201ENST00000621046 635 ntBASIC2.38□□□□□ -2.03
ZNF541Q9H0D2 CASC19-280ENST00000642102 1351 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 RNU6-142P-201ENST00000384019 107 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 MIR9-3-201ENST00000385084 90 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 CBX3P9-201ENST00000402326 552 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 RN7SKP158-201ENST00000410453 326 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 AL513185.2-201ENST00000425543 193 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 MTND1P2-201ENST00000430604 821 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 GPM6BP3-201ENST00000442797 145 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 PCMTD1P1-201ENST00000455560 355 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 PPP1R2P5-201ENST00000457256 603 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 AP005902.1-201ENST00000521358 186 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 TRAV32-201ENST00000553993 340 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 MIR3672-201ENST00000584290 82 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 AP001836.1-201ENST00000604675 523 ntBASIC2.37□□□□□ -2.03
ZNF541Q9H0D2 AL356157.2-201ENST00000605122 111 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms