Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DEFB131E-202ENST00000602581 683 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 7SK.8-201ENST00000612110 250 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 7SK.11-201ENST00000615477 250 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 7SK.13-201ENST00000622040 250 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 U4.7-201ENST00000638126 106 ntBASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
UPF3BQ9BZI7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 SNORD31B-201ENST00000364977 69 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 MIR515-2-201ENST00000384883 83 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 MIR515-1-201ENST00000384884 83 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 RPS3AP37-201ENST00000419176 745 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 SNRPEP8-201ENST00000442866 260 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 AC016925.1-201ENST00000458303 298 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 snoU13.30-201ENST00000458951 104 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 AC067942.3-201ENST00000512025 362 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 MTND2P7-201ENST00000521337 640 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 AL590229.1-201ENST00000603497 542 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 AL159152.1-201ENST00000635019 2587 ntBASIC0.86□□□□□ -2.27
UPF3BQ9BZI7 RPS20P2-201ENST00000402520 389 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 ART2BP-201ENST00000453501 499 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 MIR5692A1-201ENST00000580523 69 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 AC107304.1-201ENST00000604229 296 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 AL356157.2-201ENST00000605122 111 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 AL365434.2-201ENST00000607979 234 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 AL353149.1-201ENST00000610667 244 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 AC091925.1-201ENST00000623204 462 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 SNORD98-201ENST00000636377 67 ntBASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.85□□□□□ -2.27
UPF3BQ9BZI7 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNA5SP347-201ENST00000362445 119 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNU6-862P-201ENST00000362804 105 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNU6-1141P-201ENST00000364520 107 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNA5SP201-201ENST00000410316 124 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNU6-1245P-201ENST00000411130 106 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 AC137499.1-201ENST00000427602 88 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 AC117454.1-201ENST00000491120 168 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 TRBVA-201ENST00000498804 316 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNU1-86P-201ENST00000516108 154 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNU1-107P-201ENST00000516617 154 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNA5SP503-201ENST00000517047 117 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 7SK.7-201ENST00000603504 247 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 AL031775.1-201ENST00000607014 887 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 AL158211.2-201ENST00000607282 395 ntBASIC0.84□□□□□ -2.27
UPF3BQ9BZI7 RNU6-527P-201ENST00000363425 104 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 RNU4-56P-201ENST00000364700 142 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 RNY4P16-201ENST00000364768 94 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 RNU6-16P-201ENST00000384385 107 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 AC078809.1-201ENST00000427601 140 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 AL049829.1-201ENST00000465411 156 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 RNA5SP337-201ENST00000517007 109 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 MIR4711-201ENST00000578274 70 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 MIR3976-201ENST00000606807 139 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 AL021879.1-201ENST00000611756 288 ntBASIC0.83□□□□□ -2.28
UPF3BQ9BZI7 RNU6-1123P-201ENST00000362347 106 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 RNU6-105P-201ENST00000363909 104 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 RNU1-96P-201ENST00000364163 162 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AL117342.1-201ENST00000404861 406 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 MTCO2P29-201ENST00000465212 189 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AP000797.1-201ENST00000478870 387 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 SNORA19.3-201ENST00000516165 130 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 RNA5SP476-201ENST00000516613 103 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 MIR3118-1-201ENST00000581787 76 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AL158032.1-201ENST00000605401 106 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AC008945.2-201ENST00000606056 604 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AL451064.1-201ENST00000607718 471 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AC104073.3-201ENST00000610942 955 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AC040896.1-201ENST00000613819 479 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 AP002782.1-201ENST00000623107 614 ntBASIC0.82□□□□□ -2.28
UPF3BQ9BZI7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 RNU5E-10P-201ENST00000363506 118 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 RNU6-331P-201ENST00000384724 107 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 SNORA12.2-201ENST00000391040 156 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms