Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 Y_RNA.221-201ENST00000364248 96 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 Y_RNA.323-201ENST00000365157 109 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 RNU1-100P-201ENST00000365255 165 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 RNU6-1124P-201ENST00000384169 107 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 Y_RNA.528-201ENST00000384575 108 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 Y_RNA.587-201ENST00000391210 103 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 SNORA3.3-201ENST00000408712 125 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 AC005326.1-201ENST00000429197 123 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 AC090515.1-201ENST00000465295 476 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 RPL39P34-201ENST00000477141 156 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 AC103975.1-201ENST00000482506 483 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 RNA5SP154-201ENST00000516193 111 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 CKS1BP7-201ENST00000522230 235 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 AC022655.2-201ENST00000577280 318 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 MIR4325-201ENST00000583049 90 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 AL451007.1-201ENST00000595491 289 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
COL25A1Q9BXS0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
COL25A1Q9BXS0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL25A1Q9BXS0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 RNY1P10-201ENST00000363268 113 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 SNORD87-201ENST00000364849 89 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 Y_RNA.432-201ENST00000384087 111 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 MIR570-201ENST00000384917 97 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 RNU2-55P-201ENST00000411146 174 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 AC019205.3-201ENST00000424573 156 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 AL121890.1-201ENST00000435457 205 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 AC021205.2-201ENST00000480069 347 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 MLLT10P2-201ENST00000506434 249 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 ATP5EP1-201ENST00000510257 156 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 MIR4769-201ENST00000584126 77 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 AC015914.2-201ENST00000618167 288 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 MAPK10-286ENST00000641208 8747 ntBASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL25A1Q9BXS0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 ADAM3A-203ENST00000461344 2157 ntBASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 RN7SKP101-201ENST00000411376 320 ntBASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 TOMM22P2-201ENST00000430735 237 ntBASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 AC008155.2-201ENST00000464337 397 ntBASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 RNU6-109P-201ENST00000516364 107 ntBASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 RNU6-184P-201ENST00000516514 107 ntBASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 RNU6-158P-201ENST00000517104 100 ntBASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL25A1Q9BXS0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 AC118273.1-201ENST00000525324 3006 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 ASNSP1-201ENST00000518311 1939 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 RNU6-1080P-201ENST00000383982 107 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 Y_RNA.466-201ENST00000384294 113 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 RNU6-972P-201ENST00000391208 107 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 SNORA48.8-201ENST00000391324 134 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 FTH1P15-201ENST00000406984 280 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 RNU2-32P-201ENST00000411193 191 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 AL021397.1-201ENST00000451806 248 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 AL133162.1-201ENST00000463228 453 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 AC090525.1-201ENST00000479116 478 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 SNORA70.12-201ENST00000516084 153 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 SNORD115-40-201ENST00000606510 82 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 MIR6868-201ENST00000611215 58 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 MIR6134-201ENST00000617606 109 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms