Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RN7SL594P-201ENST00000470590 287 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 TRBVB-201ENST00000477100 408 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 TRBV12-2-201ENST00000489763 344 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 RNU6-138P-201ENST00000515952 107 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 RNA5SP24-201ENST00000516478 95 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 RNU6-111P-201ENST00000517179 105 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 MIR5701-3-201ENST00000578890 82 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 MIR5701-1-201ENST00000585138 82 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 RPS29P30-201ENST00000600975 111 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 MIR5701-2-201ENST00000615634 82 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 AC064859.1-201ENST00000624741 174 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 AC243829.7-201ENST00000633081 225 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 AC002543.1-201ENST00000299783 1954 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
LRFN3Q9BTN0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LRFN3Q9BTN0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.105-201ENST00000363182 111 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.471-201ENST00000384312 102 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 MIR764-201ENST00000390811 85 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 U3.39-201ENST00000408569 239 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 AC092423.1-201ENST00000430165 186 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 AC243964.1-201ENST00000441814 261 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 AC007969.2-201ENST00000441891 191 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 RPS29P12-201ENST00000460178 152 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 ANXA2P1-201ENST00000505539 926 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 RRN3P3-201ENST00000549207 578 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 AC090897.2-201ENST00000581715 130 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 AC090617.7-201ENST00000623952 126 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 AC241585.2-209ENST00000638217 143 ntBASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.27□□□□□ -1.89
LRFN3Q9BTN0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 ZNF299P-201ENST00000406845 1804 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AC006504.1-201ENST00000562493 3666 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.4-201ENST00000362333 112 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RNU6-708P-201ENST00000384217 107 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RNU6-611P-201ENST00000384276 104 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 HLFP1-201ENST00000402375 499 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RNU6-121P-201ENST00000410525 99 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RNU6-130P-201ENST00000411112 103 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RPL21P38-201ENST00000418090 167 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 EIF1AXP1-201ENST00000419267 435 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 EIF4EP2-201ENST00000422816 654 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AC009414.1-201ENST00000427200 443 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AL591806.2-201ENST00000433122 173 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 SEM1P1-201ENST00000506694 209 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RAC1P5-201ENST00000512182 576 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RNU6-911P-201ENST00000516523 104 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AC034114.1-201ENST00000520293 285 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AC115990.1-201ENST00000526957 301 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 MIR5696-201ENST00000578474 85 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AC137590.2-201ENST00000619709 240 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AC097372.5-201ENST00000623665 376 ntBASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
LRFN3Q9BTN0 AP006437.1-201ENST00000641440 3685 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.20-201ENST00000362479 113 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 RNU6-212P-201ENST00000362642 104 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 SNORD114-19-201ENST00000363072 75 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.183-201ENST00000363882 113 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 RNU6-595P-201ENST00000363944 107 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 Y_RNA.416-201ENST00000384014 113 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 RNU6-622P-201ENST00000384272 103 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 MIR628-201ENST00000385229 95 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 SNORA69.1-201ENST00000390904 137 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 AL512633.1-201ENST00000399931 655 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 AC138623.1-201ENST00000418060 216 ntBASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.25□□□□□ -1.89
LRFN3Q9BTN0 AC007098.1-201ENST00000420122 367 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms