Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 Y_RNA.72-201ENST00000362894 103 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 SNORA40.19-201ENST00000390846 128 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AL357139.1-201ENST00000407792 426 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 SNORD23.1-201ENST00000408212 104 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AL139413.1-201ENST00000421309 217 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 SRIP1-201ENST00000489235 288 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AC026464.5-201ENST00000562497 722 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AC233702.2-202ENST00000562547 291 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 RPS3AP23-202ENST00000574601 686 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AC009994.1-201ENST00000606889 253 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AC005520.5-201ENST00000613926 164 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 AC012640.5-201ENST00000623897 319 ntBASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HERPUD2Q9BSE4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
HERPUD2Q9BSE4 CASC19-280ENST00000642102 1351 ntBASIC2.65□□□□□ -1.98
HERPUD2Q9BSE4 SNORD115-3-201ENST00000363100 82 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 RNU2-52P-201ENST00000410680 190 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 SRIP3-201ENST00000413200 219 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AL513124.1-201ENST00000450410 614 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 snoU13.6-201ENST00000458785 104 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-329P-201ENST00000459618 107 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 RPL31P58-201ENST00000469001 379 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AC107032.1-201ENST00000485945 480 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 MTCO2P30-201ENST00000503662 364 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 SNORA31.15-201ENST00000516771 132 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 RNU1-54P-201ENST00000517181 120 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AC004486.1-201ENST00000546846 233 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AC090517.1-201ENST00000569307 266 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 MIR4790-201ENST00000577799 79 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AL117336.2-201ENST00000602435 335 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AC007742.2-201ENST00000618226 398 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 MIR203B-201ENST00000636080 86 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 AC099654.14-201ENST00000638599 341 ntBASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HERPUD2Q9BSE4 Y_RNA.301-201ENST00000364990 103 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-234P-201ENST00000365229 104 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 MIR196B-201ENST00000384852 84 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 AC138393.2-201ENST00000414742 246 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 MTND3P23-201ENST00000431980 347 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 AC008571.1-201ENST00000467232 300 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 AC096725.1-201ENST00000514266 313 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 RAB11AP2-201ENST00000545905 639 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 AC010297.1-201ENST00000623948 149 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 AC092608.2-201ENST00000624427 218 ntBASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
HERPUD2Q9BSE4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 CBX3P1-201ENST00000325243 554 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 SNORA72.1-201ENST00000363485 129 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-876P-201ENST00000391295 104 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 FGF7P8-201ENST00000402994 292 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 RNU2-41P-201ENST00000410991 178 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MTND3P8-201ENST00000412909 339 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AC098614.3-201ENST00000438957 440 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 ANXA2P1-201ENST00000505539 926 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AC093259.1-201ENST00000509755 300 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AC005741.1-201ENST00000511094 432 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-991P-201ENST00000516168 107 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 Y_RNA.682-201ENST00000516457 100 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 SNORA31.25-201ENST00000517242 134 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MIR4529-201ENST00000578110 78 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MIR4742-201ENST00000581069 85 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MIR3670-2-201ENST00000582974 65 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MIR3670-1-201ENST00000584160 65 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MIR3670-3-201ENST00000584855 65 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AC078899.2-201ENST00000595282 212 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AL049779.4-201ENST00000604500 156 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 RPL17P51-201ENST00000605218 238 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MIR3670-4-201ENST00000612260 65 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MIR6128-201ENST00000615528 109 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AC137590.2-201ENST00000619709 240 ntBASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AL136360.1-201ENST00000503377 1900 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms