Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RPL23AP36-201ENST00000413895 458 ntBASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 RPL9P9-202ENST00000466501 579 ntBASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 AC090897.2-201ENST00000581715 130 ntBASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 RPS15AP11-201ENST00000594193 385 ntBASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 AC019193.3-201ENST00000609144 554 ntBASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 ZNF271P-202ENST00000465539 1970 ntBASIC2.4□□□□□ -2.03
RTP3Q9BQQ7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AL356292.1-201ENST00000283110 373 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 SNORA38-201ENST00000363946 132 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1317P-201ENST00000364582 104 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.384-201ENST00000383909 102 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.387-201ENST00000383918 102 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 RNU6-692P-201ENST00000384496 107 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 RNA5SP181-201ENST00000410246 98 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1304P-201ENST00000411374 106 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 PCMTD1P1-201ENST00000455560 355 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.635-201ENST00000459041 101 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC112771.1-201ENST00000463581 102 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 RPL36AP48-201ENST00000485521 314 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC108729.3-201ENST00000513484 108 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 RNU1-54P-201ENST00000517181 120 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC105137.2-201ENST00000569073 466 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 CPDP1-201ENST00000579660 283 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC060766.3-201ENST00000591442 263 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AL137847.3-201ENST00000611521 109 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AL161423.1-201ENST00000613700 262 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AL359314.1-201ENST00000616913 261 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC024581.2-201ENST00000619986 252 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 MIR219B-201ENST00000637023 88 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AL359854.1-201ENST00000614203 1594 ntBASIC2.39□□□□□ -2.03
RTP3Q9BQQ7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 MTND4P27-201ENST00000450813 1354 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 RNU4-79P-201ENST00000362764 141 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.482-201ENST00000384377 111 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 RNU6-790P-201ENST00000384479 105 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.509-201ENST00000384506 99 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 RNU6-601P-201ENST00000384540 107 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 MIR544A-201ENST00000384855 91 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 MIR517A-201ENST00000385001 87 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 SNORA26.9-201ENST00000391322 122 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 RPL30P12-201ENST00000474666 353 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 SNORA25.11-201ENST00000515935 105 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 RNU6-559P-201ENST00000516151 98 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 SNORA31.15-201ENST00000516771 132 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 AC079598.5-201ENST00000547460 117 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 AC023824.2-201ENST00000566185 400 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 FRG2DP-202ENST00000566967 323 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 MIR4765-201ENST00000585007 77 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 AC096772.1-201ENST00000609146 564 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 MIR7157-201ENST00000635801 60 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 SNORD114-19-201ENST00000363072 75 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 RNU6-529P-201ENST00000363383 104 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.473-201ENST00000384333 102 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1245P-201ENST00000411130 106 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC138623.1-201ENST00000418060 216 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC097463.2-201ENST00000421074 142 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC124916.1-201ENST00000444020 547 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AL031659.1-201ENST00000447075 539 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.632-201ENST00000459189 102 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 RPS29P27-201ENST00000463711 170 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1053P-201ENST00000515930 101 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 RNU6-295P-201ENST00000516901 104 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 RNU6-612P-201ENST00000516909 102 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 IMMP1LP2-201ENST00000552954 492 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AP001836.1-201ENST00000604675 523 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AC124303.1-201ENST00000605703 360 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 MIR3976-201ENST00000606807 139 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 AL133215.3-201ENST00000609801 448 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms