Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 ROCK1P1-201ENST00000573767 549 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 RNU6-312P-201ENST00000364629 107 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 AL353621.1-201ENST00000418219 243 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL12A1Q99715 AC011005.2-201ENST00000487324 359 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.4□□□□□ -2.47
COL12A1Q99715 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL12A1Q99715 RNU6-586P-201ENST00000517265 104 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.4□□□□□ -2.47
COL12A1Q99715 HMGB1P33-201ENST00000563485 527 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 SNORD115-2-201ENST00000362842 82 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 MT-TY-201ENST00000387409 66 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 RNU6-750P-201ENST00000390946 107 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.41□□□□□ -2.47
COL12A1Q99715 AC099677.2-201ENST00000436385 175 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 AC124293.1-201ENST00000530034 493 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 AF038458.1-201ENST00000588406 262 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 AC024581.2-201ENST00000619986 252 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 AC009268.2-201ENST00000621925 457 ntBASIC-0.41□□□□□ -2.47
COL12A1Q99715 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 MT-TM-201ENST00000387377 68 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 MT-TC-201ENST00000387405 66 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AL606923.1-201ENST00000406616 190 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.41□□□□□ -2.48
COL12A1Q99715 RNU6-980P-201ENST00000516925 103 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC109329.1-201ENST00000518744 317 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC138869.1-201ENST00000568623 124 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.41□□□□□ -2.48
COL12A1Q99715 AL391813.1-201ENST00000603098 260 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC013476.2-201ENST00000614456 459 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC068792.1-201ENST00000621354 417 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 MTND5P16-201ENST00000460269 1703 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 RNU6-217P-201ENST00000384164 104 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 RNU6-480P-201ENST00000384332 107 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC069257.2-201ENST00000441819 155 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 RPL7P55-201ENST00000450522 746 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.41□□□□□ -2.48
COL12A1Q99715 HMGB1P28-201ENST00000507778 552 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC008628.1-201ENST00000508663 265 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 SNORD79.1-201ENST00000516069 84 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 SNORA31.10-201ENST00000516482 106 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AP003168.1-201ENST00000530091 307 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AC015688.6-201ENST00000577737 104 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 MIR4770-201ENST00000579149 58 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AL583856.2-201ENST00000606298 543 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 AL603839.4-201ENST00000624658 1005 ntBASIC-0.41□□□□□ -2.48
COL12A1Q99715 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 RNU6-925P-201ENST00000384629 104 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC002429.1-201ENST00000437672 148 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 ELOCP30-201ENST00000447108 299 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 HMGN2P26-201ENST00000463169 339 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
COL12A1Q99715 RNA5SP272-201ENST00000516095 111 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 BNIP3P23-201ENST00000599655 511 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC013468.1-201ENST00000608680 598 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AF129408.1-201ENST00000608767 431 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 MIR101-2-201ENST00000362195 79 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 MIR194-1-201ENST00000384892 85 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC116562.3-201ENST00000506136 177 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC010460.2-201ENST00000509054 677 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 RNA5SP268-201ENST00000516828 124 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC134698.4-201ENST00000523451 826 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 AC009032.1-201ENST00000617574 431 ntBASIC-0.42□□□□□ -2.48
COL12A1Q99715 RNU6-884P-201ENST00000363889 107 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 SNORD115-42-201ENST00000364273 82 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 RPL36AP48-201ENST00000485521 314 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AC109445.1-201ENST00000512356 383 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 RNU6-881P-201ENST00000516813 102 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL12A1Q99715 AC006213.4-201ENST00000616184 634 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AL162726.3-218ENST00000636401 95 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
COL12A1Q99715 RPL22P22-201ENST00000395439 379 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AC104332.1-201ENST00000440471 797 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms