Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.71□□□□□ -2.3
CCL13Q99616 RPS26P45-201ENST00000471748 340 ntBASIC0.71□□□□□ -2.3
CCL13Q99616 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
CCL13Q99616 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.71□□□□□ -2.3
CCL13Q99616 AL442163.3-201ENST00000554110 156 ntBASIC0.71□□□□□ -2.3
CCL13Q99616 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.71□□□□□ -2.3
CCL13Q99616 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.71□□□□□ -2.3
CCL13Q99616 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.71□□□□□ -2.3
CCL13Q99616 AC107304.1-201ENST00000604229 296 ntBASIC0.71□□□□□ -2.3
CCL13Q99616 MIR6504-201ENST00000613520 61 ntBASIC0.71□□□□□ -2.3
CCL13Q99616 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.71□□□□□ -2.3
CCL13Q99616 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 RNU6-336P-201ENST00000364891 107 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 Y_RNA.324-201ENST00000365165 102 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 RNU6-1026P-201ENST00000384465 108 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 RNU6-45P-201ENST00000384471 107 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 RN7SKP61-201ENST00000410642 295 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.7□□□□□ -2.3
CCL13Q99616 USP9YP14-201ENST00000430663 563 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.7□□□□□ -2.3
CCL13Q99616 AC007547.1-201ENST00000462177 490 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 Y_RNA.676-201ENST00000516393 96 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 HSPE1P4-201ENST00000550617 308 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 EIF4A1P12-201ENST00000551910 141 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.7□□□□□ -2.3
CCL13Q99616 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
CCL13Q99616 AC091489.2-201ENST00000566263 604 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AC136932.1-201ENST00000574771 208 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 MIR4709-201ENST00000577272 72 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 FAM71BP1-201ENST00000604431 523 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AC105129.3-201ENST00000605455 485 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AL020996.3-201ENST00000606617 222 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AC104010.1-201ENST00000616889 150 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AC008147.4-201ENST00000617570 1204 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AC126177.8-201ENST00000618339 1015 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 AC068647.2-201ENST00000637380 353 ntBASIC0.7□□□□□ -2.3
CCL13Q99616 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.7□□□□□ -2.3
CCL13Q99616 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CCL13Q99616 RNU1-76P-201ENST00000362903 159 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 Y_RNA.132-201ENST00000363421 102 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 SNORD32A-201ENST00000364805 84 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 SNORA4.2-201ENST00000365313 147 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 RNA5SP259-201ENST00000365541 109 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 RNU6-877P-201ENST00000383868 107 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 RNU6-378P-201ENST00000384324 107 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 MIR520E-201ENST00000384867 87 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 SNORA26.3-201ENST00000391119 136 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 Y_RNA.608-201ENST00000410647 95 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.69□□□□□ -2.3
CCL13Q99616 PRPS1P1-201ENST00000445305 876 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 GAPDHP17-201ENST00000449858 1001 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 RPL39P28-201ENST00000465655 155 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 AL163973.1-201ENST00000484753 577 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.69□□□□□ -2.3
CCL13Q99616 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.69□□□□□ -2.3
CCL13Q99616 RNU6-856P-201ENST00000516959 98 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 AC109479.2-201ENST00000517842 174 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.69□□□□□ -2.3
CCL13Q99616 MIR4509-3-201ENST00000578671 94 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 MIR4509-2-201ENST00000583920 94 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 FAM106DP-201ENST00000586416 501 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 AC078795.3-201ENST00000602913 472 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 RPL17P51-201ENST00000605218 238 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 CTHRC1P1-201ENST00000605383 469 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 AC211469.2-201ENST00000605461 205 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 MIR4509-1-201ENST00000618224 94 ntBASIC0.69□□□□□ -2.3
CCL13Q99616 AC092268.1-201ENST00000342691 405 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 Y_RNA.191-201ENST00000363972 113 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 RNU6-1187P-201ENST00000364771 110 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 RNU6-116P-201ENST00000384042 109 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 Y_RNA.576-201ENST00000384781 102 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 RNU11-5P-201ENST00000391216 129 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.68□□□□□ -2.3
CCL13Q99616 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.68□□□□□ -2.3
CCL13Q99616 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.68□□□□□ -2.3
CCL13Q99616 RPS23P5-201ENST00000495419 428 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 AC104136.1-201ENST00000512969 394 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CCL13Q99616 AC023050.3-201ENST00000541142 333 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 AC090888.2-201ENST00000559765 1144 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 MIR4661-201ENST00000582720 75 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 MIR4452-201ENST00000583004 71 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 AL356157.2-201ENST00000605122 111 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 AL158050.2-201ENST00000605336 568 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 AL353149.1-201ENST00000610667 244 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.68□□□□□ -2.3
CCL13Q99616 AL049777.1-201ENST00000622740 518 ntBASIC0.68□□□□□ -2.3
CCL13Q99616 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCL13Q99616 RNU6-428P-201ENST00000362942 107 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 RNU6-1200P-201ENST00000384162 107 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 MIR499A-201ENST00000384903 122 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AC060773.1-201ENST00000421698 310 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AC013410.2-201ENST00000422627 201 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.67□□□□□ -2.3
CCL13Q99616 AL133396.1-201ENST00000432048 687 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 MTATP6P16-201ENST00000434543 526 ntBASIC0.67□□□□□ -2.3
CCL13Q99616 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.67□□□□□ -2.3
CCL13Q99616 RPS29P1-201ENST00000465274 159 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms