Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 AC233981.2-201ENST00000611524 1614 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.4□□□□□ -1.86
CDK5RAP1Q96SZ6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.4□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-961P-201ENST00000363893 105 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-843P-201ENST00000384454 104 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-959P-201ENST00000384671 107 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-1154P-201ENST00000391001 104 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 SNORA48.8-201ENST00000391324 134 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 UBA52P6-201ENST00000399822 382 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AL357075.1-201ENST00000404107 726 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 Z85995.1-201ENST00000415547 335 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AC007919.1-201ENST00000429380 217 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AL627311.1-201ENST00000431514 115 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 CST9LP2-201ENST00000437612 320 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AF186996.7-201ENST00000492781 209 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-572P-201ENST00000516724 80 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR2355-201ENST00000517199 87 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 UBL5P4-201ENST00000562584 236 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR3651-201ENST00000630427 90 ntBASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
CDK5RAP1Q96SZ6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC103988.1-201ENST00000566382 2177 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-78P-201ENST00000362897 107 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU5E-7P-201ENST00000365290 117 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-17P-201ENST00000384245 107 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-18P-201ENST00000384527 107 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-21P-201ENST00000384710 107 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR491-201ENST00000384877 84 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RNA5SP213-201ENST00000391031 106 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 SNORA40C-201ENST00000391285 128 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RPL23AP36-201ENST00000413895 458 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC024067.1-201ENST00000426199 223 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 Z82210.1-201ENST00000440037 231 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC092798.1-201ENST00000458542 409 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC073901.1-201ENST00000462471 408 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR4782-201ENST00000577987 79 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 FAM60BP-201ENST00000578364 658 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC008749.1-201ENST00000597650 306 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AL161756.2-201ENST00000604597 246 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 U4.7-201ENST00000638126 106 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC009541.1-201ENST00000438279 2662 ntBASIC3.39□□□□□ -1.87
CDK5RAP1Q96SZ6 AC100821.1-201ENST00000523153 2479 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU1-70P-201ENST00000362618 164 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU4-9P-201ENST00000364951 139 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 SNORA9-201ENST00000384215 133 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 Y_RNA.497-201ENST00000384447 98 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-1001P-201ENST00000411265 100 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 TOMM20P4-201ENST00000427861 435 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 Z75741.1-201ENST00000446793 314 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 UQCRBP2-201ENST00000447827 297 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 RN7SL442P-201ENST00000473804 320 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU5F-8P-201ENST00000515941 111 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-567P-201ENST00000516746 107 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 AC241585.2-209ENST00000638217 143 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 AL109809.4-201ENST00000603520 2185 ntBASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDK5RAP1Q96SZ6 AC007496.3-201ENST00000624987 3443 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms