Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC016256.1-201ENST00000547971 354 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.88□□□□□ -2.11
RAB40CQ96S21 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.88□□□□□ -2.11
RAB40CQ96S21 AC023043.2-201ENST00000589678 1026 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 MIR3976-201ENST00000606807 139 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 PCGEM1.1-201ENST00000613431 131 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 AC006504.8-201ENST00000621046 635 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 AL136221.1-201ENST00000621449 509 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 ZNF658B-202ENST00000615961 3375 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
RAB40CQ96S21 Y_RNA.151-201ENST00000363566 112 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 RNU6-378P-201ENST00000384324 107 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 RNA5SP465-201ENST00000391195 109 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 RN7SKP284-201ENST00000411002 343 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AL158823.1-201ENST00000418441 478 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 WARS2P1-201ENST00000429678 537 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 MTND2P29-201ENST00000438595 412 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 NFU1P2-201ENST00000448700 469 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC108938.1-201ENST00000451204 136 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AL109933.2-201ENST00000452651 260 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 PCMTD1P1-201ENST00000455560 355 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 MTND1P11-201ENST00000456661 876 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 PMCHL2-203ENST00000457791 237 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC132942.1-201ENST00000486753 483 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 ANXA2P1-201ENST00000505539 926 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 PTP4A1P4-201ENST00000512479 322 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 RNU6-864P-201ENST00000516256 108 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RAB40CQ96S21 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 SNORA59B-202ENST00000578183 701 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC122108.2-201ENST00000611946 526 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC093913.1-201ENST00000614178 329 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 U6atac.1-201ENST00000616025 117 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AL359314.1-201ENST00000616913 261 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.87□□□□□ -2.11
RAB40CQ96S21 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.87□□□□□ -2.11
RAB40CQ96S21 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAB40CQ96S21 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RAB40CQ96S21 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.86□□□□□ -2.11
RAB40CQ96S21 SNORD115-3-201ENST00000363100 82 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 RNU6-1286P-201ENST00000383871 107 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 SNORD116-11-201ENST00000383882 92 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 RNU6-26P-201ENST00000383985 107 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 RNU6-968P-201ENST00000384076 107 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 Y_RNA.500-201ENST00000384466 111 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 RNU6-831P-201ENST00000384548 107 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RAB40CQ96S21 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RAB40CQ96S21 AL357139.1-201ENST00000407792 426 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 Y_RNA.599-201ENST00000410489 109 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40CQ96S21 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40CQ96S21 AC130509.1-201ENST00000464158 433 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 AC026436.1-201ENST00000510537 270 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 RNU6-991P-201ENST00000516168 107 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 RNA5SP320-201ENST00000516263 124 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 RNA5SP24-201ENST00000516478 95 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 EIF4A1P12-201ENST00000551910 141 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 AP003465.2-201ENST00000602571 373 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 AC005520.5-201ENST00000613926 164 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 MIR6766-201ENST00000622641 72 ntBASIC1.86□□□□□ -2.11
RAB40CQ96S21 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
RAB40CQ96S21 RNA5SP276-201ENST00000362580 94 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 RNA5SP68-201ENST00000363885 119 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 RNU6-234P-201ENST00000365229 104 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 RNU6-1013P-201ENST00000384180 107 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 SNORA29-201ENST00000384183 140 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 RNU6-301P-201ENST00000384277 107 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 SNORD14D-201ENST00000384390 87 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 MIR517A-201ENST00000385001 87 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 Z82205.1-201ENST00000428456 297 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 MTND4LP16-201ENST00000440828 295 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40CQ96S21 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40CQ96S21 snoU13.6-201ENST00000458785 104 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 AC069439.1-201ENST00000494739 167 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 AC093259.1-201ENST00000509755 300 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 MTND4LP26-201ENST00000518144 282 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.85□□□□□ -2.11
RAB40CQ96S21 MRPS36P4-201ENST00000534436 298 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40CQ96S21 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40CQ96S21 MIR4513-201ENST00000581077 86 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 FGF7P1-201ENST00000582820 288 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 MIR5007-201ENST00000583098 95 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms