Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.47□□□□□ -2.17
USP47Q96K76 SNORD114-21-201ENST00000606412 72 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AP001506.1-201ENST00000615444 211 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 SNORD98-201ENST00000636377 67 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
USP47Q96K76 RNU6-428P-201ENST00000362942 107 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 RNU6-1097P-201ENST00000363586 107 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 RNU6-26P-201ENST00000383985 107 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 RNU6-142P-201ENST00000384019 107 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 RNU6-43P-201ENST00000384302 107 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 MTND3P17-201ENST00000416968 344 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 BX295541.1-201ENST00000417774 250 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.47□□□□□ -2.17
USP47Q96K76 AC010975.2-201ENST00000427781 588 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AL596276.1-201ENST00000434465 418 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.47□□□□□ -2.17
USP47Q96K76 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.47□□□□□ -2.17
USP47Q96K76 SNORA44.1-201ENST00000517031 108 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AC023050.3-201ENST00000541142 333 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.47□□□□□ -2.17
USP47Q96K76 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.47□□□□□ -2.17
USP47Q96K76 MIR3915-201ENST00000578518 97 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AC008752.3-201ENST00000588113 712 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AC016925.2-201ENST00000605108 242 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AC008945.2-201ENST00000606056 604 ntBASIC1.47□□□□□ -2.17
USP47Q96K76 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.47□□□□□ -2.17
USP47Q96K76 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
USP47Q96K76 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.46□□□□□ -2.18
USP47Q96K76 RNU6-108P-201ENST00000365558 107 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 NCOR1P3-201ENST00000420479 303 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AL590135.1-201ENST00000422215 156 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AC019205.3-201ENST00000424573 156 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AC016700.2-201ENST00000446011 156 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 RPS29P15-201ENST00000458329 171 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 RPS23P4-201ENST00000487908 423 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AC015911.1-201ENST00000495111 156 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.46□□□□□ -2.18
USP47Q96K76 RN7SKP287-201ENST00000516546 266 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 RNA5SP503-201ENST00000517047 117 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
USP47Q96K76 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.46□□□□□ -2.18
USP47Q96K76 AP003072.2-201ENST00000527756 676 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AC109446.1-201ENST00000566172 220 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.46□□□□□ -2.18
USP47Q96K76 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.46□□□□□ -2.18
USP47Q96K76 AC110760.3-201ENST00000598794 467 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AC107304.1-201ENST00000604229 296 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AC093424.1-201ENST00000604999 338 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 AC120349.3-201ENST00000624377 529 ntBASIC1.46□□□□□ -2.18
USP47Q96K76 RNU4-38P-201ENST00000364472 129 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 RNU6-336P-201ENST00000364891 107 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USP47Q96K76 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.45□□□□□ -2.18
USP47Q96K76 RNU6-393P-201ENST00000384475 107 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 MIR30A-201ENST00000385092 71 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 MIR934-201ENST00000401241 83 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 AC244670.1-201ENST00000436879 112 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 AL022238.1-201ENST00000442557 355 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.45□□□□□ -2.18
USP47Q96K76 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.45□□□□□ -2.18
USP47Q96K76 MTND1P22-201ENST00000510572 951 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 SNORD27.1-201ENST00000516319 72 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 AC109479.2-201ENST00000517842 174 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.45□□□□□ -2.18
USP47Q96K76 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.45□□□□□ -2.18
USP47Q96K76 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.45□□□□□ -2.18
USP47Q96K76 MIR3136-201ENST00000583498 78 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 AC123912.5-201ENST00000605470 343 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 AL391262.2-201ENST00000622466 494 ntBASIC1.45□□□□□ -2.18
USP47Q96K76 ZNF680P1-201ENST00000436625 1469 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 LINC02555-201ENST00000563933 1951 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 MIR424-201ENST00000362227 98 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 MIR373-201ENST00000362273 69 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 RNU6-1141P-201ENST00000364520 107 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 Y_RNA.332-201ENST00000365271 113 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 RNU6-439P-201ENST00000384188 106 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 RNU6-297P-201ENST00000384636 107 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 SNORD70.1-201ENST00000391007 85 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.44□□□□□ -2.18
USP47Q96K76 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.44□□□□□ -2.18
USP47Q96K76 PRPS1P1-201ENST00000445305 876 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 AL357134.1-201ENST00000445848 426 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 AL133217.1-201ENST00000450980 425 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.44□□□□□ -2.18
USP47Q96K76 AC130509.1-201ENST00000464158 433 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 AC010409.1-201ENST00000487382 476 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 FAM206BP-201ENST00000510179 541 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.44□□□□□ -2.18
USP47Q96K76 LRRC34P2-201ENST00000514850 553 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 SNORA31.16-201ENST00000516773 139 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.44□□□□□ -2.18
USP47Q96K76 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 BNIP3P16-201ENST00000589779 534 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 AC091805.2-201ENST00000603848 235 ntBASIC1.44□□□□□ -2.18
USP47Q96K76 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.44□□□□□ -2.18
USP47Q96K76 AC068700.1-201ENST00000565862 3754 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.43□□□□□ -2.18
USP47Q96K76 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.43□□□□□ -2.18
USP47Q96K76 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms