Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC091152.3-201ENST00000604227 325 ntBASIC-0.32□□□□□ -2.46
SPG11Q96JI7 AL031176.1-201ENST00000604554 466 ntBASIC-0.32□□□□□ -2.46
SPG11Q96JI7 AC064807.4-201ENST00000607201 407 ntBASIC-0.32□□□□□ -2.46
SPG11Q96JI7 AC093875.1-201ENST00000623688 504 ntBASIC-0.32□□□□□ -2.46
SPG11Q96JI7 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 MIR573-201ENST00000384964 99 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 RNU2-33P-201ENST00000410344 192 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AC005094.1-201ENST00000440420 368 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 MRPL42P4-201ENST00000453267 443 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AC113410.1-201ENST00000505029 247 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AL391840.1-201ENST00000571144 367 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AL391001.1-201ENST00000602747 715 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.33□□□□□ -2.46
SPG11Q96JI7 RNU5A-1-201ENST00000362698 116 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 RNU6-140P-201ENST00000384566 108 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 MIR520A-201ENST00000384862 85 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 MTCO2P31-201ENST00000402702 684 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 COX6CP10-201ENST00000416832 224 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 RPL31P53-201ENST00000457065 348 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 snoU13.27-201ENST00000459278 104 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.33□□□□□ -2.46
SPG11Q96JI7 RPF2P2-201ENST00000504693 896 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.33□□□□□ -2.46
SPG11Q96JI7 SNORA40.12-201ENST00000516329 111 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 RNA5SP290-201ENST00000517133 127 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AC105185.1-201ENST00000518705 535 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 BNIP3P6-201ENST00000549284 499 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.33□□□□□ -2.46
SPG11Q96JI7 AC004067.1-201ENST00000608733 700 ntBASIC-0.33□□□□□ -2.46
SPG11Q96JI7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
SPG11Q96JI7 SNORA4.2-201ENST00000365313 147 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
SPG11Q96JI7 RNU6-444P-201ENST00000383988 108 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 MIR520G-201ENST00000385064 90 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 MIR520H-201ENST00000385126 88 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AL606662.1-201ENST00000445763 553 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 MTND1P9-201ENST00000453775 944 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 RNU7-165P-201ENST00000458864 60 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC104982.1-201ENST00000478775 574 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.34□□□□□ -2.46
SPG11Q96JI7 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 RNU6-678P-201ENST00000516832 109 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.34□□□□□ -2.46
SPG11Q96JI7 MTCO2P15-201ENST00000532655 656 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.34□□□□□ -2.46
SPG11Q96JI7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC005261.5-201ENST00000596280 355 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AL590396.4-201ENST00000636779 956 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.34□□□□□ -2.46
SPG11Q96JI7 ZNF886P-201ENST00000450781 723 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC011979.2-201ENST00000527568 352 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 TRAV32-201ENST00000553993 340 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC011195.1-201ENST00000578177 177 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 MIR4432-201ENST00000581823 84 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 AC117490.2-201ENST00000610042 594 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 FTX_2.1-201ENST00000618816 94 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 SCARNA4-202ENST00000625402 129 ntBASIC-0.34□□□□□ -2.46
SPG11Q96JI7 SNORD114-12-201ENST00000365400 75 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 RNU6-269P-201ENST00000391077 97 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 AL121978.1-201ENST00000402778 359 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 RNA5SP504-201ENST00000410676 117 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 RNU2-15P-201ENST00000410692 191 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 SNORA40.8-201ENST00000411034 126 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.35□□□□□ -2.46
SPG11Q96JI7 RPS15AP10-201ENST00000432472 382 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 RNU6-333P-201ENST00000459117 107 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 AC018630.3-201ENST00000542637 96 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.35□□□□□ -2.46
SPG11Q96JI7 HMGB1P51-201ENST00000605166 638 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 AC107952.2-201ENST00000606048 486 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.35□□□□□ -2.46
SPG11Q96JI7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.35□□□□□ -2.46
SPG11Q96JI7 AC107982.1-201ENST00000507171 1300 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 AC092268.1-201ENST00000342691 405 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 SNORD116-13-201ENST00000384408 92 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 RNU6-950P-201ENST00000384651 107 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 RNU2-47P-201ENST00000410649 186 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.35□□□□□ -2.47
SPG11Q96JI7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.35□□□□□ -2.47
SPG11Q96JI7 USP9YP14-201ENST00000430663 563 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.35□□□□□ -2.47
SPG11Q96JI7 AL008629.1-201ENST00000438615 184 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 USP9YP22-201ENST00000438971 294 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.35□□□□□ -2.47
SPG11Q96JI7 RNU6-947P-201ENST00000516264 106 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 RNU2-46P-201ENST00000517038 113 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 AC106038.2-201ENST00000520706 568 ntBASIC-0.35□□□□□ -2.47
SPG11Q96JI7 AC023158.1-201ENST00000561632 1025 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms