Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 AC000123.3-201ENST00000624029 4975 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 MIRLET7A1-201ENST00000362295 80 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 Y_RNA.567-201ENST00000384736 106 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 RNA5SP113-201ENST00000410486 84 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 RN7SKP206-201ENST00000410823 293 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 AC097463.2-201ENST00000421074 142 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 AC007161.1-204ENST00000423039 460 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 RPEP3-201ENST00000425462 676 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 SNORD125-201ENST00000459538 96 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 COX6B1P2-201ENST00000489624 230 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 RAC1P2-201ENST00000511164 579 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 SNORA4.4-201ENST00000515921 135 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 AP002004.2-201ENST00000531656 154 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 RN7SL290P-201ENST00000578661 300 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 MIR4472-2-201ENST00000582069 67 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 AC006116.3-201ENST00000592968 361 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 MIR4302-201ENST00000638058 60 ntBASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.81□□□□□ -1.64
MS4A3Q96HJ5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 A2MP1-204ENST00000566278 4130 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 SNORA1B-201ENST00000362535 133 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 SNORD68-201ENST00000363214 84 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 SNORA16A-201ENST00000384342 137 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 MIR551A-201ENST00000385042 96 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 AC114811.1-201ENST00000507207 168 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 RNU7-153P-201ENST00000516455 62 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 RNU6-856P-201ENST00000516959 98 ntBASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MS4A3Q96HJ5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 RNA5SP319-201ENST00000362768 119 ntBASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 RNU6-471P-201ENST00000383944 106 ntBASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 RNU6-1274P-201ENST00000384557 107 ntBASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 MIR607-201ENST00000385241 96 ntBASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 AL135938.1-201ENST00000443141 297 ntBASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 RNU6-448P-201ENST00000517052 107 ntBASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 AL513043.2-201ENST00000573941 143 ntBASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 AC006971.1-201ENST00000407916 4486 ntBASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A3Q96HJ5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 RNU6-686P-201ENST00000364839 107 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 RNU6-800P-201ENST00000384473 103 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 RNA5SP129-201ENST00000410276 118 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 RNA5SP296-201ENST00000410523 111 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 AC079355.1-201ENST00000421770 223 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 RPS29P28-201ENST00000446439 141 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 AP002884.2-201ENST00000471647 395 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 SNORD45.4-201ENST00000516629 73 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 RPPH1-2P-201ENST00000516688 293 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 MIR3936-201ENST00000584304 110 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 AL591926.8-201ENST00000616876 211 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 AP005019.3-201ENST00000620418 560 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 AL161912.2-201ENST00000565707 3007 ntBASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.78□□□□□ -1.64
MS4A3Q96HJ5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms