Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RPS26P42-201ENST00000413485 326 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AL445685.2-201ENST00000422551 342 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 RPL9P9-202ENST00000466501 579 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 MTCO1P29-201ENST00000496868 288 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AC087441.2-201ENST00000529141 262 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AC026464.5-201ENST00000562497 722 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AP000654.2-201ENST00000605633 586 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AC009994.1-201ENST00000606889 253 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AC022202.1-201ENST00000613515 211 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 MIR1248-201ENST00000629190 106 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 AC024614.3-201ENST00000637860 256 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 MTND5P6-201ENST00000422338 1798 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.89-201ENST00000363031 102 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 U3.9-201ENST00000363823 204 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 SNORD14D-201ENST00000384390 87 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 RNU6-1215P-201ENST00000384441 102 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AL512604.1-201ENST00000404812 257 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 MIR1283-2-201ENST00000408621 87 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.615-201ENST00000410769 117 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AC027124.2-201ENST00000428249 105 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 USP9YP28-201ENST00000435142 589 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AL049873.1-201ENST00000480540 376 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AC083904.1-201ENST00000487828 231 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AC104564.1-201ENST00000493028 407 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AC005741.1-201ENST00000511094 432 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AC005034.5-201ENST00000604219 466 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AL133215.3-201ENST00000609801 448 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 AC063943.3-201ENST00000615562 356 ntBASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.55□□□□□ -2.16
RPUSD4Q96CM3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.157-201ENST00000363638 102 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 RNU6-534P-201ENST00000364877 106 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 RNU6-26P-201ENST00000383985 107 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 RNU6-784P-201ENST00000384330 106 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 RNA5SP465-201ENST00000391195 109 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 RNA5SP450-201ENST00000411206 102 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AC012306.1-201ENST00000423267 114 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AC104576.1-201ENST00000524225 88 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AC026371.1-201ENST00000551867 419 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 FGF7P1-201ENST00000582820 288 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AC012557.2-201ENST00000605919 418 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 MIR8076-201ENST00000611401 83 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 RMST_6.1-201ENST00000611980 203 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AL138726.1-201ENST00000614873 333 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 AC139792.2-201ENST00000624218 587 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 MIR3688-2-201ENST00000636963 87 ntBASIC1.54□□□□□ -2.16
RPUSD4Q96CM3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 AL357139.1-201ENST00000407792 426 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 RNU6-325P-201ENST00000411132 105 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 VN1R36P-201ENST00000414936 291 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 AL135786.1-201ENST00000415892 214 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 AC009541.1-201ENST00000438279 2662 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 AMD1P1-201ENST00000457220 922 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 AC093259.1-201ENST00000509755 300 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 RPL39P5-202ENST00000512505 151 ntBASIC1.53□□□□□ -2.16
RPUSD4Q96CM3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms