Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC103975.1-201ENST00000482506 483 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 CKS1BP2-201ENST00000497342 240 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 RNU6-1170P-201ENST00000515974 106 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AC093249.1-201ENST00000567049 203 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AL050343.2-201ENST00000607338 280 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 AC006026.1-201ENST00000444025 1803 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 snoU2_19.1-201ENST00000362361 80 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 Y_RNA.187-201ENST00000363918 113 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 RNU4-9P-201ENST00000364951 139 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 SNORA41-201ENST00000384675 132 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 AC243428.1-201ENST00000421099 264 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 AC011816.1-201ENST00000441346 546 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 AL109933.2-201ENST00000452651 260 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 RN7SL297P-201ENST00000483161 293 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 AC093303.1-201ENST00000514549 295 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 RPL12P50-201ENST00000603116 116 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 Z98751.3-201ENST00000604447 521 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 AC080078.3-201ENST00000605407 463 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 AL160413.1-201ENST00000622780 310 ntBASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHMP4CQ96CF2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CHMP4CQ96CF2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 AC062016.1-201ENST00000355719 319 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 RNU6-595P-201ENST00000363944 107 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 RPS3P1-201ENST00000456781 192 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 RNU7-152P-201ENST00000458982 64 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 AC021146.2-201ENST00000504736 556 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 MIR3923-201ENST00000579521 83 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 MIR4672-201ENST00000583126 81 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 SCARNA4-201ENST00000629045 128 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 AL450472.1-202ENST00000637286 180 ntBASIC3.21□□□□□ -1.9
CHMP4CQ96CF2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 RNY1P16-201ENST00000363063 111 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 Y_RNA.419-201ENST00000384041 102 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 Y_RNA.579-201ENST00000390939 94 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AL358453.1-201ENST00000422522 250 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AC012306.1-201ENST00000423267 114 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AC092427.1-202ENST00000430569 476 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AL445687.1-201ENST00000439946 251 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 RN7SKP210-201ENST00000459176 261 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AC068781.1-201ENST00000488231 618 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 RPL23AP75-201ENST00000491601 451 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AL590705.4-201ENST00000532209 134 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 CYP4A27P-201ENST00000567218 190 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AC090616.3-201ENST00000582184 217 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AC005014.2-201ENST00000607795 599 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 AC137590.2-201ENST00000619709 240 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 MIR5739-201ENST00000619803 80 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 MAPK10-266ENST00000641066 6555 ntBASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHMP4CQ96CF2 RNU6-1159P-201ENST00000362933 107 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 SNORD56.5-201ENST00000364281 72 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 MIR29B2-201ENST00000385055 81 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 MIR9-1-201ENST00000385198 89 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 RNU6-220P-201ENST00000390919 107 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 RNU6-700P-201ENST00000391043 107 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 FO393413.1-201ENST00000402892 195 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 AL139095.1-201ENST00000404326 391 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 AF228730.4-201ENST00000421457 183 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 AL353752.1-201ENST00000454946 260 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 AC087477.1-201ENST00000465747 340 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 RPL17P19-201ENST00000489069 552 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 AC022493.2-201ENST00000506122 481 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 RNU7-175P-201ENST00000515915 61 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 ELOCP31-201ENST00000540463 467 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 AL078605.1-201ENST00000603529 500 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 CYP2C61P-201ENST00000604072 290 ntBASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHMP4CQ96CF2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 RNU5B-2P-201ENST00000363036 113 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 RNU6-1040P-201ENST00000383974 107 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 AC112220.1-201ENST00000434628 355 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 UBE2V1P7-201ENST00000446395 340 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 CYP2C59P-201ENST00000457790 269 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 snoU13.6-201ENST00000458785 104 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 SRIP1-201ENST00000489235 288 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms