Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 snoU13.6-201ENST00000458785 104 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 Y_RNA.708-201ENST00000516950 96 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 IMMP1LP2-201ENST00000552954 492 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 MIR4795-201ENST00000584182 89 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 AC104984.5-201ENST00000586878 94 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 IGHVIII-44-202ENST00000636235 289 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 SNORA25.6-201ENST00000364121 118 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 RNU1-112P-201ENST00000364401 164 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 RNA5SP125-201ENST00000364843 120 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 RNA5SP240-201ENST00000365355 128 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 RNU6-968P-201ENST00000384076 107 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 Y_RNA.533-201ENST00000384596 114 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 SNORD5.1-201ENST00000458800 75 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 HMGB1P35-201ENST00000503360 598 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 HMGB3P3-201ENST00000510526 400 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 MTND3P22-201ENST00000510932 243 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 APOOP3-201ENST00000536787 586 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AL078605.1-201ENST00000603529 500 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AL713866.2-201ENST00000603579 219 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 AP000654.2-201ENST00000605633 586 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 KPNA2P1-201ENST00000458289 1591 ntBASIC2.64□□□□□ -1.99
SH3KBP1Q96B97 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 RNU6-142P-201ENST00000384019 107 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 SNORA6-201ENST00000384033 151 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 CBX3P9-201ENST00000402326 552 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 RN7SKP61-201ENST00000410642 295 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 RNU2-52P-201ENST00000410680 190 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 OOSP1P1-201ENST00000423265 274 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 ARL5AP4-201ENST00000430731 512 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 RPL23AP50-201ENST00000434149 455 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AL353705.4-201ENST00000449661 238 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 RPL30P15-201ENST00000457129 321 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 RN7SL297P-201ENST00000483161 293 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AC021146.2-201ENST00000504736 556 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 RNA5SP384-201ENST00000516615 116 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 CBX3P7-201ENST00000532876 502 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AC078899.2-201ENST00000595282 212 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AL034555.1-201ENST00000604816 211 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AC008121.3-201ENST00000618726 433 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AL669831.3-213ENST00000636676 183 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AL450472.1-202ENST00000637286 180 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AP000560.1-201ENST00000624150 1937 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 AC233981.2-201ENST00000611524 1614 ntBASIC2.63□□□□□ -1.99
SH3KBP1Q96B97 MTND5P9-201ENST00000503854 1755 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 Y_RNA.387-201ENST00000383918 102 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 SNORA29-201ENST00000384183 140 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AC078809.1-201ENST00000427601 140 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 IPO7P1-201ENST00000442031 636 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 IFNA11P-201ENST00000446352 526 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 Y_RNA.632-201ENST00000459189 102 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AC022447.4-201ENST00000504053 364 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AC121758.2-201ENST00000553271 193 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 MYL12BP1-201ENST00000569826 507 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 FGF7P1-201ENST00000582820 288 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AL158827.2-201ENST00000602494 330 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AL138963.2-201ENST00000605137 226 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 LARP7P1-201ENST00000605576 316 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AC084781.2-201ENST00000615568 161 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 AL691447.3-201ENST00000635020 330 ntBASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SH3KBP1Q96B97 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 AC092268.1-201ENST00000342691 405 ntBASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 Y_RNA.259-201ENST00000364619 101 ntBASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 RNU6-593P-201ENST00000364716 112 ntBASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 RNU6-784P-201ENST00000384330 106 ntBASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 SNORA12-201ENST00000391162 147 ntBASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 HMGB3P2-201ENST00000411913 584 ntBASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
SH3KBP1Q96B97 AL353997.1-201ENST00000432936 108 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms