Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 Y_RNA.504-201ENST00000384481 104 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 RNA5SP354-201ENST00000391247 136 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 RNU6-394P-201ENST00000410735 107 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 RN7SKP51-201ENST00000410781 304 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX1Q92499 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX1Q92499 AL358453.1-201ENST00000422522 250 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX1Q92499 AC005326.1-201ENST00000429197 123 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 AC243964.1-201ENST00000441814 261 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 RBMY2UP-201ENST00000453474 324 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 AC097462.2-201ENST00000504623 481 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 MIR2276-201ENST00000516886 89 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX1Q92499 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX1Q92499 TGIF1P1-201ENST00000558095 802 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX1Q92499 AC023824.2-201ENST00000566185 400 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX1Q92499 LARP7P3-201ENST00000579888 337 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 MIR4282-201ENST00000583613 67 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 AC073657.2-201ENST00000605661 303 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 RMST_8.1-201ENST00000610287 165 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 U6.106-201ENST00000636360 105 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 U6.98-201ENST00000637157 84 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 AC010889.1-201ENST00000566193 2666 ntBASIC3.7□□□□□ -1.82
DDX1Q92499 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
DDX1Q92499 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX1Q92499 AL365361.1-201ENST00000566942 3481 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX1Q92499 Y_RNA.44-201ENST00000362676 108 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX1Q92499 RNU6-1081P-201ENST00000384537 107 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 RNU6-750P-201ENST00000390946 107 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX1Q92499 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX1Q92499 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX1Q92499 ANXA2P1-201ENST00000505539 926 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 SNORD116-28-201ENST00000516123 91 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 MTND5P41-201ENST00000517498 206 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX1Q92499 MIR4659A-201ENST00000580269 81 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 RPL23AP78-201ENST00000599928 470 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX1Q92499 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 AC091152.3-201ENST00000604227 325 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 AL356157.2-201ENST00000605122 111 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 XIST_intron.1-201ENST00000619444 68 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
DDX1Q92499 AC009541.1-201ENST00000438279 2662 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 AC091152.2-201ENST00000591628 2569 ntBASIC3.69□□□□□ -1.82
DDX1Q92499 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
DDX1Q92499 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX1Q92499 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DDX1Q92499 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
DDX1Q92499 Y_RNA.123-201ENST00000363338 102 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 Y_RNA.240-201ENST00000364469 95 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 Y_RNA.292-201ENST00000364904 97 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 RNU6-1027P-201ENST00000383998 107 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 MIR490-201ENST00000384865 128 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 RNA5SP390-201ENST00000410191 113 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 AL365496.1-201ENST00000426885 215 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX1Q92499 AC109925.1-201ENST00000478069 331 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX1Q92499 SNORA70.19-201ENST00000516717 90 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 SNORA31.23-201ENST00000517219 133 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.68□□□□□ -1.82
DDX1Q92499 AC090617.3-201ENST00000573670 475 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 AC060766.3-201ENST00000591442 263 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 U7.8-201ENST00000619968 63 ntBASIC3.68□□□□□ -1.82
DDX1Q92499 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX1Q92499 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX1Q92499 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.68□□□□□ -1.82
DDX1Q92499 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
DDX1Q92499 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.68□□□□□ -1.82
DDX1Q92499 AL513302.2-201ENST00000562313 1842 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX1Q92499 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX1Q92499 RNU6-1301P-201ENST00000362724 104 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RNU4-90P-201ENST00000362773 141 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RNU6-326P-201ENST00000365480 107 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX1Q92499 AP002088.1-201ENST00000382740 395 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RNU6-301P-201ENST00000384277 107 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RNU6-748P-201ENST00000384648 107 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 MIR544A-201ENST00000384855 91 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 MIR184-201ENST00000384962 84 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 MIR767-201ENST00000390228 109 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
DDX1Q92499 RNA5SP213-201ENST00000391031 106 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RNU1-101P-201ENST00000391171 127 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RNU6-918P-201ENST00000391219 106 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RNU6-651P-201ENST00000411040 105 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.67□□□□□ -1.82
DDX1Q92499 COTL1P1-201ENST00000422309 375 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 AC007969.2-201ENST00000441891 191 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 AL049830.2-201ENST00000480072 201 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 RNU7-175P-201ENST00000515915 61 ntBASIC3.67□□□□□ -1.82
DDX1Q92499 NDUFB9P3-201ENST00000521269 501 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms