Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU6-297P-201ENST00000384636 107 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-29P-201ENST00000384637 107 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 Y_RNA.560-201ENST00000384689 102 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNA5SP201-201ENST00000410316 124 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AC078809.1-201ENST00000427601 140 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AL033528.1-201ENST00000453780 140 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU7-125P-201ENST00000458760 62 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 snoU13.9-201ENST00000458927 103 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AC010409.1-201ENST00000487382 476 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AC099513.1-201ENST00000490423 301 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.03□□□□□ -2.24
LMX1AQ8TE12 LRRC34P2-201ENST00000514850 553 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-377P-201ENST00000515965 102 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-1223P-201ENST00000517124 104 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AP003034.1-201ENST00000534621 422 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AL034555.1-201ENST00000604816 211 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AL356157.2-201ENST00000605122 111 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AP000654.2-201ENST00000605633 586 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AC008945.2-201ENST00000606056 604 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AC083806.3-201ENST00000614016 455 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AP001506.1-201ENST00000615444 211 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 MIR6788-201ENST00000618842 66 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 AC008993.2-201ENST00000631744 806 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 MTND5P9-201ENST00000503854 1755 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RNY4P34-201ENST00000364779 95 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RNU6-336P-201ENST00000364891 107 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RNU6-26P-201ENST00000383985 107 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RNU6-692P-201ENST00000384496 107 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AL357139.1-201ENST00000407792 426 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RN7SKP61-201ENST00000410642 295 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RNU6-248P-201ENST00000410720 107 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 HMGN1P14-201ENST00000412459 517 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 C1DP2-201ENST00000418167 426 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 NCOR1P3-201ENST00000420479 303 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 MTCO2P34-201ENST00000421994 607 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RPL23AP95-201ENST00000426806 265 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AL162395.1-201ENST00000457882 422 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RNU7-182P-201ENST00000459009 62 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC007547.1-201ENST00000462177 490 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 GMFBP1-201ENST00000467831 427 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 MTCO3P7-201ENST00000510008 774 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 SNORA25.17-201ENST00000517184 124 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 RNU6-902P-201ENST00000517212 91 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC016957.1-201ENST00000534895 309 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AL137100.2-201ENST00000555786 315 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC005786.1-201ENST00000588553 154 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AL050343.2-201ENST00000607338 280 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AP001596.2-201ENST00000608410 312 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC097372.5-201ENST00000623665 376 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC022418.1-201ENST00000624118 445 ntBASIC1.02□□□□□ -2.25
LMX1AQ8TE12 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.02□□□□□ -2.25
LMX1AQ8TE12 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.01□□□□□ -2.25
LMX1AQ8TE12 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-1287P-201ENST00000362914 107 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-23P-201ENST00000363283 107 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-1303P-201ENST00000364841 107 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-1029P-201ENST00000384109 107 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 Y_RNA.480-201ENST00000384364 102 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-939P-201ENST00000384634 107 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-1060P-201ENST00000384664 107 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 MIR1-2-201ENST00000384961 85 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 SNORA12-201ENST00000391162 147 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU4-46P-201ENST00000410818 138 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-293P-201ENST00000411259 106 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-195P-201ENST00000411352 109 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.01□□□□□ -2.25
LMX1AQ8TE12 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AL117339.3-201ENST00000418733 162 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AC123900.1-201ENST00000420390 96 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AL590556.1-201ENST00000423231 483 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AL365203.2-201ENST00000423444 196 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AC010975.2-201ENST00000427781 588 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AL133396.1-201ENST00000432048 687 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 SNAP23P1-201ENST00000433229 246 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AC087477.1-201ENST00000465747 340 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AC005908.1-201ENST00000468701 347 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AC145146.1-201ENST00000496370 254 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.01□□□□□ -2.25
LMX1AQ8TE12 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-1178P-201ENST00000516674 107 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 RNU6-759P-201ENST00000516740 103 ntBASIC1.01□□□□□ -2.25
LMX1AQ8TE12 Z99289.3-201ENST00000605586 594 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 340 ms