Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ADAM3A-203ENST00000461344 2157 ntBASIC4.9□□□□□ -1.62
NKX2-3Q8TAU0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NKX2-3Q8TAU0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NKX2-3Q8TAU0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NKX2-3Q8TAU0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.9□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 MIR549A-201ENST00000385268 96 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 RNU6-440P-201ENST00000390882 105 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 RN7SL585P-201ENST00000470538 280 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 SNORA70.12-201ENST00000516084 153 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 SNORA31.23-201ENST00000517219 133 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 SNORA70.24-201ENST00000517233 118 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 AC025754.2-201ENST00000606491 432 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 RMST_8.1-201ENST00000610287 165 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 BMS1P21-201ENST00000634565 365 ntBASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NKX2-3Q8TAU0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 RNA5SP125-201ENST00000364843 120 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 AP002088.1-201ENST00000382740 395 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 RNA5SP496-201ENST00000391240 109 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 SNORA36B-201ENST00000410438 131 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 AC093578.1-201ENST00000415219 368 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 AL590383.1-201ENST00000428602 75 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 TOMM22P2-201ENST00000430735 237 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 HLA-N-201ENST00000437516 135 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 AC010285.1-201ENST00000470580 392 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 MRPS36P2-201ENST00000512569 299 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 RNU7-115P-201ENST00000516433 55 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 AC096577.2-201ENST00000611455 153 ntBASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-3Q8TAU0 MAPK10-286ENST00000641208 8747 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 MAPK10-303ENST00000641324 3959 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 U3.15-201ENST00000365398 212 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 SNORA72-201ENST00000384339 132 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 RPL27AP8-201ENST00000424277 446 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 RNA5SP395-201ENST00000516567 118 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 AC015720.1-201ENST00000565251 277 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 AC011471.1-201ENST00000585766 187 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 MIR6134-201ENST00000617606 109 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 MIR548AY-201ENST00000617669 107 ntBASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-3Q8TAU0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 AC073346.2-201ENST00000624724 2058 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 RNU1-100P-201ENST00000365255 165 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 RNU6-1014P-201ENST00000383940 103 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 MIR34B-201ENST00000385076 84 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 AC126124.2-201ENST00000413542 321 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 AC025554.1-201ENST00000505641 188 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 RNA5SP154-201ENST00000516193 111 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 RNU6-344P-201ENST00000516635 111 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 RNU6-158P-201ENST00000517104 100 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 MED28P6-201ENST00000558776 231 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-3Q8TAU0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 Y_RNA.111-201ENST00000363248 100 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 Y_RNA.323-201ENST00000365157 109 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 RNU6-1080P-201ENST00000383982 107 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 RNU6-484P-201ENST00000384016 107 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 Y_RNA.432-201ENST00000384087 111 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 U1.1-201ENST00000384101 164 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 U3.26-201ENST00000391236 204 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 RN7SKP101-201ENST00000411376 320 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 AC125238.1-201ENST00000448842 249 ntBASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-3Q8TAU0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms