Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RPL39P39-201ENST00000455840 151 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AC093899.1-201ENST00000457984 376 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 MTND1P22-201ENST00000510572 951 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 RNU6-947P-201ENST00000516264 106 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 RNU2-34P-201ENST00000516534 121 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 RNA5SP102-201ENST00000516865 106 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AC027419.1-201ENST00000522976 328 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 MIR4711-201ENST00000578274 70 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AC008752.3-201ENST00000588113 712 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AC004223.2-201ENST00000590309 544 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AC004987.4-201ENST00000603383 338 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AL445435.1-201ENST00000604232 665 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 RPL17P51-201ENST00000605218 238 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AC097065.2-201ENST00000608159 533 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 MIR6798-201ENST00000612887 67 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AC073349.3-201ENST00000617616 186 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 AL603839.4-201ENST00000624658 1005 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 OR5AK4P-201ENST00000635912 903 ntBASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
SPTSSBQ8NFR3 MIR337-201ENST00000362281 93 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 RNU6-877P-201ENST00000383868 107 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 MIR544A-201ENST00000384855 91 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 MIR660-201ENST00000385235 97 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 RNU6-278P-201ENST00000390945 109 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 AL355796.1-201ENST00000406706 323 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 RNA5SP504-201ENST00000410676 117 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 AL133217.1-201ENST00000450980 425 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 snoU13.25-201ENST00000458945 104 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 AC016256.1-201ENST00000547971 354 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 AC006927.4-201ENST00000639187 543 ntBASIC-0.14□□□□□ -2.43
SPTSSBQ8NFR3 OR4G1P-203ENST00000641984 1631 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 RNU6-78P-201ENST00000362897 107 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 RNA5SP62-201ENST00000363457 110 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 MIR32-201ENST00000384965 70 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 AL451046.2-201ENST00000403074 277 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 HMGN2P34-201ENST00000437647 269 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 AC104332.1-201ENST00000440471 797 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 AL158053.1-201ENST00000441503 453 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 TPRKBP1-201ENST00000456243 481 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 CYCTP-201ENST00000504253 315 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 AC109445.1-201ENST00000512356 383 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 SNORA62.5-201ENST00000516634 120 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 MIR5708-201ENST00000579723 85 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 MTATP6P3-201ENST00000581686 676 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 AC004832.4-201ENST00000608952 331 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 MIR8084-201ENST00000614105 89 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 AC103706.2-201ENST00000638080 240 ntBASIC-0.15□□□□□ -2.43
SPTSSBQ8NFR3 SNORD114-9-201ENST00000364370 72 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 RNU6-793P-201ENST00000384233 104 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 RNA5SP323-201ENST00000391094 133 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 RN7SKP200-201ENST00000410564 320 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 MTCO1P17-201ENST00000411522 491 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 TIMM9P2-201ENST00000419324 266 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AL162725.1-201ENST00000435405 301 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 MTCO1P19-201ENST00000443487 500 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AL353718.1-201ENST00000451028 517 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 MTATP6P9-201ENST00000515039 680 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 RNU6-917P-201ENST00000516294 104 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AP002001.1-203ENST00000534002 267 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AC109810.1-201ENST00000534066 224 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 SUB1P2-201ENST00000556401 297 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 SNORA4-201ENST00000584302 138 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AL606834.3-201ENST00000602615 496 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AC006270.3-201ENST00000605967 1036 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AL136317.1-201ENST00000612653 226 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 AC078938.1-201ENST00000620993 318 ntBASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
SPTSSBQ8NFR3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 RNU6-199P-201ENST00000362954 107 ntBASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 RNU6-190P-201ENST00000384154 102 ntBASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 AL603865.2-201ENST00000401679 213 ntBASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 RPL31P35-201ENST00000431058 377 ntBASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 MTCO1P27-201ENST00000448269 226 ntBASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 AC093534.1-201ENST00000504977 132 ntBASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 AC108729.3-201ENST00000513484 108 ntBASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.17□□□□□ -2.44
SPTSSBQ8NFR3 RNA5SP227-201ENST00000516184 113 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms