Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC093913.1-201ENST00000614178 329 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 MTND4P5-201ENST00000435821 1374 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 MTND4P23-201ENST00000447723 1363 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 Y_RNA.157-201ENST00000363638 102 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 SNORD32A-201ENST00000364805 84 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 Y_RNA.414-201ENST00000384011 101 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-1148P-201ENST00000410992 104 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-325P-201ENST00000411132 105 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 AL590135.1-201ENST00000422215 156 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 AC019205.3-201ENST00000424573 156 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 UBE2V1P4-201ENST00000425374 344 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 AL513185.2-201ENST00000425543 193 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 MTCO3P18-201ENST00000440206 761 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 AC016700.2-201ENST00000446011 156 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 AL137159.1-201ENST00000452808 512 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 RNU7-66P-201ENST00000459469 62 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 AC015911.1-201ENST00000495111 156 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 HMGB1P35-201ENST00000503360 598 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-1314P-201ENST00000517139 104 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 SNORA59B-202ENST00000578183 701 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 MIR3942-201ENST00000585264 109 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 SNORD98-201ENST00000636377 67 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 AC009541.1-201ENST00000438279 2662 ntBASIC1.68□□□□□ -2.14
CCDC71LQ8N9Z2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 Y_RNA.86-201ENST00000363020 111 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-128P-201ENST00000383976 107 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 SNORA12-201ENST00000391162 147 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 BTF3L4P2-201ENST00000392798 346 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 HMGN2P39-201ENST00000398005 273 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 ZNF885P-201ENST00000420174 1098 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AL590632.1-201ENST00000424289 371 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 U8.21-201ENST00000459536 136 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AC096745.1-201ENST00000509945 370 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AC025465.4-201ENST00000513422 638 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 SNORA31.16-201ENST00000516773 139 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 SCOCP1-201ENST00000554676 349 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AC100830.2-201ENST00000581636 240 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 MIR4672-201ENST00000583126 81 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 MIR3672-201ENST00000584290 82 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AC006504.8-201ENST00000621046 635 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 MIR6873-201ENST00000622788 63 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AC009033.1-201ENST00000624279 431 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 MIR1248-201ENST00000629190 106 ntBASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC71LQ8N9Z2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC245060.5-201ENST00000610778 3293 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-227P-201ENST00000362865 103 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 Y_RNA.248-201ENST00000364501 109 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-933P-201ENST00000384424 107 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 MIR521-1-201ENST00000384902 87 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 MIR1262-201ENST00000408276 93 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AP000275.1-201ENST00000411943 390 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AL590556.1-201ENST00000423231 483 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC096920.1-201ENST00000423991 241 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 RPL32P28-201ENST00000443577 397 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 RNU7-187P-201ENST00000458985 68 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC145146.1-201ENST00000496370 254 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 TRBVA-201ENST00000498804 316 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 RNA5SP137-201ENST00000516833 135 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AF235103.2-201ENST00000525753 346 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 NDUFA5P6-201ENST00000542110 379 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AP002770.2-201ENST00000543613 532 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC026271.5-201ENST00000577873 130 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC023043.2-201ENST00000589678 1026 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AL138726.1-201ENST00000614873 333 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AL132822.1-201ENST00000617063 513 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AL136221.1-201ENST00000621449 509 ntBASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC71LQ8N9Z2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
CCDC71LQ8N9Z2 RNU4-15P-201ENST00000362613 141 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-562P-201ENST00000362731 107 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 Y_RNA.151-201ENST00000363566 112 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms