Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC027807.1-201ENST00000559921 996 ntBASIC2.13□□□□□ -2.07
CCDC89Q8N998 AC026464.5-201ENST00000562497 722 ntBASIC2.13□□□□□ -2.07
CCDC89Q8N998 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC89Q8N998 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC89Q8N998 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC89Q8N998 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.13□□□□□ -2.07
CCDC89Q8N998 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.13□□□□□ -2.07
CCDC89Q8N998 DUXAP9-208ENST00000622815 614 ntBASIC2.13□□□□□ -2.07
CCDC89Q8N998 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC89Q8N998 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CCDC89Q8N998 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC89Q8N998 AL356292.1-201ENST00000283110 373 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CCDC89Q8N998 VN1R36P-201ENST00000414936 291 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC89Q8N998 AC007395.1-201ENST00000451333 677 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 AC016925.1-201ENST00000458303 298 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC89Q8N998 RPL9P6-201ENST00000492764 598 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 AC008834.1-201ENST00000511612 175 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 Y_RNA.693-201ENST00000516641 110 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 RNU2-44P-201ENST00000516795 194 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 SNORD60.2-201ENST00000516883 86 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC89Q8N998 AL512310.1-201ENST00000548639 172 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 SUB1P4-201ENST00000566062 339 ntBASIC2.12□□□□□ -2.07
CCDC89Q8N998 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC89Q8N998 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC89Q8N998 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC89Q8N998 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC89Q8N998 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 MIR340-201ENST00000362125 95 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 RNU6-1317P-201ENST00000364582 104 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 SNORA12.2-201ENST00000391040 156 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 MRPS10P2-201ENST00000431226 381 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC89Q8N998 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 SUMO2P18-201ENST00000518873 252 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC89Q8N998 AL512360.1-201ENST00000555346 234 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 MIR3198-2-201ENST00000577868 80 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 MIR3935-201ENST00000583472 104 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
CCDC89Q8N998 FER-210ENST00000628534 558 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC89Q8N998 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC89Q8N998 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC89Q8N998 AC121333.1-201ENST00000567488 2709 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 Y_RNA.132-201ENST00000363421 102 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 SNORA29-201ENST00000384183 140 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 MIR514A2-201ENST00000385131 88 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 MIR514A3-201ENST00000385132 88 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 CALM2P3-201ENST00000400429 449 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 RNU2-16P-201ENST00000410712 136 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC89Q8N998 MTCO3P46-201ENST00000425787 232 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 HSPE1P21-201ENST00000438283 308 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 AC097473.1-201ENST00000508142 408 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 RNA5SP364-201ENST00000516938 78 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC89Q8N998 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC89Q8N998 AC100830.2-201ENST00000581636 240 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 MTND5P9-201ENST00000503854 1755 ntBASIC2.1□□□□□ -2.07
CCDC89Q8N998 RNU6-562P-201ENST00000362731 107 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 MIR30A-201ENST00000385092 71 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC89Q8N998 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC89Q8N998 RPL31P63-201ENST00000422565 375 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 AC027124.2-201ENST00000428249 105 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 SEPT14P3-201ENST00000439401 183 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC89Q8N998 AL732372.2-207ENST00000445840 183 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 SEPT14P2-201ENST00000453405 183 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 snoU13.6-201ENST00000458785 104 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC89Q8N998 AC092436.3-201ENST00000511788 257 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 SEPT14P4-201ENST00000513445 186 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC89Q8N998 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC89Q8N998 FO082796.1-201ENST00000523795 183 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC89Q8N998 HSBP1P1-201ENST00000555205 166 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC89Q8N998 AC022513.1-201ENST00000624512 117 ntBASIC2.09□□□□□ -2.07
CCDC89Q8N998 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
CCDC89Q8N998 Y_RNA.231-201ENST00000364358 102 ntBASIC2.08□□□□□ -2.08
CCDC89Q8N998 SNORA18.2-201ENST00000383865 132 ntBASIC2.08□□□□□ -2.08
CCDC89Q8N998 RNU6-1286P-201ENST00000383871 107 ntBASIC2.08□□□□□ -2.08
CCDC89Q8N998 MIR300-201ENST00000401138 83 ntBASIC2.08□□□□□ -2.08
CCDC89Q8N998 RNA5SP494-201ENST00000410653 129 ntBASIC2.08□□□□□ -2.08
CCDC89Q8N998 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC89Q8N998 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC89Q8N998 AL356320.1-201ENST00000429616 163 ntBASIC2.08□□□□□ -2.08
CCDC89Q8N998 USP9YP28-201ENST00000435142 589 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms