Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.56□□□□□ -2
CLIP4Q8N3C7 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 AC022616.4-201ENST00000522985 181 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 COX6CP5-201ENST00000527162 228 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.56□□□□□ -2
CLIP4Q8N3C7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.56□□□□□ -2
CLIP4Q8N3C7 AC025281.1-201ENST00000567026 265 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 AC104581.2-201ENST00000572227 430 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 MIR3605-201ENST00000583214 100 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 MIR5195-201ENST00000583555 115 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 VN1R91P-201ENST00000594377 169 ntBASIC2.56□□□□□ -2
CLIP4Q8N3C7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLIP4Q8N3C7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLIP4Q8N3C7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.56□□□□□ -2
CLIP4Q8N3C7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.55□□□□□ -2
CLIP4Q8N3C7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CLIP4Q8N3C7 Y_RNA.47-201ENST00000362697 108 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 RNA5SP139-201ENST00000364340 117 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 SNORA18.3-201ENST00000384122 132 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 SNORA9-201ENST00000384215 133 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 RNU6-750P-201ENST00000390946 107 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 MIR190B-201ENST00000401119 79 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 Y_RNA.592-201ENST00000410274 109 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.55□□□□□ -2
CLIP4Q8N3C7 AL353705.4-201ENST00000449661 238 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.55□□□□□ -2
CLIP4Q8N3C7 snoU13.30-201ENST00000458951 104 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 RPL30P1-201ENST00000488676 339 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 RPL23AP75-201ENST00000491601 451 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 MTCO2P24-201ENST00000515611 426 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 SNORA74D-201ENST00000516404 141 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 AC040926.1-201ENST00000530195 238 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.55□□□□□ -2
CLIP4Q8N3C7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.55□□□□□ -2
CLIP4Q8N3C7 AC091152.3-201ENST00000604227 325 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 AL356157.2-201ENST00000605122 111 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 AC100812.1-201ENST00000607622 580 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 U2.1-201ENST00000618978 145 ntBASIC2.55□□□□□ -2
CLIP4Q8N3C7 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.55□□□□□ -2
CLIP4Q8N3C7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.55□□□□□ -2
CLIP4Q8N3C7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
CLIP4Q8N3C7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLIP4Q8N3C7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 RNU6-238P-201ENST00000363313 106 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 Y_RNA.149-201ENST00000363558 117 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 Y_RNA.176-201ENST00000363815 109 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 RNU4-9P-201ENST00000364951 139 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 Y_RNA.380-201ENST00000365663 111 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 RNU6-26P-201ENST00000383985 107 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 RNU6-19P-201ENST00000384718 107 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 MIR483-201ENST00000385070 76 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 MIR628-201ENST00000385229 95 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 AL512633.1-201ENST00000399931 655 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 RNA5SP390-201ENST00000410191 113 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CLIP4Q8N3C7 AC114482.1-201ENST00000418010 247 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 AL358453.1-201ENST00000422522 250 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 PTGES3P4-201ENST00000426243 356 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 MTCYBP9-201ENST00000431021 303 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.54□□□□□ -2
CLIP4Q8N3C7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.54□□□□□ -2
CLIP4Q8N3C7 RPL39P29-201ENST00000447779 157 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 MTCO3P8-201ENST00000453691 755 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.54□□□□□ -2
CLIP4Q8N3C7 RNU7-87P-201ENST00000459343 62 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 RPS29P12-201ENST00000460178 152 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 TOMM22P6-201ENST00000465035 409 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.54□□□□□ -2
CLIP4Q8N3C7 RPL30P12-201ENST00000474666 353 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 RNU6-635P-201ENST00000516651 102 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 Y_RNA.706-201ENST00000516933 99 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 CKS1BP7-201ENST00000522230 235 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.54□□□□□ -2
CLIP4Q8N3C7 AC022080.3-201ENST00000544433 482 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 HSPE1P4-201ENST00000550617 308 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 AC007375.1-201ENST00000554513 578 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.54□□□□□ -2
CLIP4Q8N3C7 MIR4503-201ENST00000582187 83 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 AC010928.2-201ENST00000588017 287 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 Z98751.3-201ENST00000604447 521 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLIP4Q8N3C7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
CLIP4Q8N3C7 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.54□□□□□ -2
CLIP4Q8N3C7 AC010889.1-201ENST00000566193 2666 ntBASIC2.54□□□□□ -2
CLIP4Q8N3C7 HAUS6P2-201ENST00000433254 2404 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 Y_RNA.358-201ENST00000365491 99 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 RNU6-1286P-201ENST00000383871 107 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 RNU6-142P-201ENST00000384019 107 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 SNORA29-201ENST00000384183 140 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 RNA5SP354-201ENST00000391247 136 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms