Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU6-217P-201ENST00000384164 104 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 Y_RNA.462-201ENST00000384268 102 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 AL591034.1-201ENST00000407447 340 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 AC007098.1-201ENST00000420122 367 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.39□□□□□ -1.87
SYNE4Q8N205 AL139109.1-201ENST00000455491 297 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 RNA5SP310-201ENST00000459084 116 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 snoU109.2-201ENST00000459316 135 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 RNU6-1282P-201ENST00000516735 96 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 SNORA31.19-201ENST00000517079 126 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.39□□□□□ -1.87
SYNE4Q8N205 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.39□□□□□ -1.87
SYNE4Q8N205 AC008121.1-201ENST00000603244 268 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 U6.92-201ENST00000636464 89 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYNE4Q8N205 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYNE4Q8N205 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYNE4Q8N205 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYNE4Q8N205 Y_RNA.16-201ENST00000362421 102 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 RNU6-212P-201ENST00000362642 104 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 Y_RNA.183-201ENST00000363882 113 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 RNU6-1062P-201ENST00000383908 107 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 SNORA40C-201ENST00000391285 128 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 RNU2-68P-201ENST00000410878 191 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.38□□□□□ -1.87
SYNE4Q8N205 NDUFB1P2-201ENST00000449477 176 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC013470.1-201ENST00000453438 462 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC146507.2-201ENST00000460608 476 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.38□□□□□ -1.87
SYNE4Q8N205 AK3P2-201ENST00000507976 429 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC067942.3-201ENST00000512025 362 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC096725.1-201ENST00000514266 313 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 RNU6-911P-201ENST00000516523 104 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC130289.1-201ENST00000577321 73 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 RPS29P30-201ENST00000600975 111 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC005046.1-201ENST00000608515 625 ntBASIC3.38□□□□□ -1.87
SYNE4Q8N205 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.38□□□□□ -1.87
SYNE4Q8N205 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYNE4Q8N205 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SYNE4Q8N205 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 RNU6-200P-201ENST00000364743 107 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 Y_RNA.358-201ENST00000365491 99 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 Y_RNA.405-201ENST00000383979 100 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 Y_RNA.451-201ENST00000384200 100 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 Y_RNA.524-201ENST00000384564 100 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 Y_RNA.561-201ENST00000384694 100 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 RNU6-700P-201ENST00000391043 107 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 SNORA3.2-201ENST00000408221 125 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 RNU2-20P-201ENST00000410425 191 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 SDAD1P3-201ENST00000427380 333 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 Z82188.1-201ENST00000436709 154 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 RPL23AP14-201ENST00000468281 468 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 RPL30P10-201ENST00000488148 337 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 AC090115.4-201ENST00000609970 188 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 FTX_3.1-201ENST00000610451 147 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 AC004852.3-201ENST00000614131 326 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SYNE4Q8N205 Z75746.1-201ENST00000440243 2080 ntBASIC3.37□□□□□ -1.87
SYNE4Q8N205 AC093010.3-201ENST00000570269 15214 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.36□□□□□ -1.87
SYNE4Q8N205 Y_RNA.20-201ENST00000362479 113 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 RNU1-76P-201ENST00000362903 159 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 Y_RNA.238-201ENST00000364441 102 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 Y_RNA.274-201ENST00000364714 101 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 RNU6-336P-201ENST00000364891 107 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SYNE4Q8N205 Y_RNA.416-201ENST00000384014 113 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 Y_RNA.515-201ENST00000384535 112 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 Y_RNA.526-201ENST00000384572 110 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SYNE4Q8N205 RPL21P75-201ENST00000396599 483 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 RPL21P28-201ENST00000401418 483 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNE4Q8N205 AL590556.1-201ENST00000423231 483 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 TMEM167AP1-201ENST00000423409 219 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 AC007560.1-201ENST00000426912 237 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 AL627311.1-201ENST00000431514 115 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNE4Q8N205 IFNA11P-201ENST00000446352 526 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SYNE4Q8N205 AC092798.1-201ENST00000458542 409 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 U8.21-201ENST00000459536 136 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 RPL21P39-201ENST00000463605 483 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 AC087190.1-201ENST00000484462 480 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 AC107032.1-201ENST00000485945 480 ntBASIC3.36□□□□□ -1.87
SYNE4Q8N205 AC132942.1-201ENST00000486753 483 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms