Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RNA5SP289-201ENST00000362332 137 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RNA5SP432-201ENST00000362480 116 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 U8.2-201ENST00000363156 134 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RNA5SP393-201ENST00000363423 117 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.187-201ENST00000363918 113 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 SNORA41-201ENST00000384675 132 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 SNORA26.3-201ENST00000391119 136 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 SNORA3.2-201ENST00000408221 125 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RNU6-1304P-201ENST00000411374 106 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AC078809.1-201ENST00000427601 140 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RPS15AP7-201ENST00000439294 405 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AC009296.1-201ENST00000443146 155 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AC010095.1-201ENST00000443543 144 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RPL30P12-201ENST00000474666 353 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RPL23AP70-201ENST00000483361 460 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 RNA5SP384-201ENST00000516615 116 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AC105137.2-201ENST00000569073 466 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AC005899.2-201ENST00000584353 90 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AC084781.2-201ENST00000615568 161 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 U4.3-201ENST00000621047 82 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AC009541.1-201ENST00000438279 2662 ntBASIC2.75□□□□□ -1.97
VPS52Q8N1B4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS52Q8N1B4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 MTND5P9-201ENST00000503854 1755 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.2-201ENST00000362330 96 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.123-201ENST00000363338 102 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 RNU6-694P-201ENST00000364071 147 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 DEFA7P-201ENST00000382676 285 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.419-201ENST00000384041 102 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 EIF1AXP1-201ENST00000419267 435 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 BX276092.3-201ENST00000424182 230 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 Z98742.2-201ENST00000431564 187 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC011816.1-201ENST00000441346 546 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC112771.1-201ENST00000463581 102 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 RPL36AP48-201ENST00000485521 314 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 RPL22P13-201ENST00000493291 347 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 RNU6-307P-201ENST00000516743 106 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC115990.1-201ENST00000526957 301 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 MIR5571-201ENST00000577998 113 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC060766.3-201ENST00000591442 263 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AL356280.1-201ENST00000603614 379 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC133104.2-201ENST00000615272 193 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AC022140.2-201ENST00000623500 188 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 AL450472.1-202ENST00000637286 180 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS52Q8N1B4 ZNF658B-202ENST00000615961 3375 ntBASIC2.74□□□□□ -1.97
VPS52Q8N1B4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 RNU6-529P-201ENST00000363383 104 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 SNORA67.1-201ENST00000364749 141 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.579-201ENST00000390939 94 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AC007064.1-201ENST00000412238 351 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AC097463.2-201ENST00000421074 142 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AC243428.1-201ENST00000421099 264 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AIMP1P2-201ENST00000425294 312 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AC244670.1-201ENST00000436879 112 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AC011753.1-201ENST00000451001 220 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 RPL30P15-201ENST00000457129 321 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 FO393415.2-201ENST00000480085 343 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AC016632.1-201ENST00000503994 196 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 RNA5SP112-201ENST00000515937 99 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 SCARNA16.2-201ENST00000516520 172 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 COX6CP5-201ENST00000527162 228 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 HSPE1P4-201ENST00000550617 308 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 MIR4273-201ENST00000582824 84 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 MIR4765-201ENST00000585007 77 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AL158827.2-201ENST00000602494 330 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS52Q8N1B4 AL691447.3-201ENST00000635020 330 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 MIR7515-201ENST00000637837 67 ntBASIC2.73□□□□□ -1.97
VPS52Q8N1B4 MTND5P10-201ENST00000603719 1809 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms