Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC138623.1-201ENST00000418060 216 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 AC244670.1-201ENST00000436879 112 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-559P-201ENST00000516151 98 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 RNA5SP402-201ENST00000517148 110 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 AC103810.6-201ENST00000606708 136 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 AC009541.1-201ENST00000438279 2662 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC007336.1-201ENST00000576365 3828 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 RNU4-79P-201ENST00000362764 141 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-655P-201ENST00000362858 107 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 RNU1-51P-201ENST00000365345 176 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 MIR521-1-201ENST00000384902 87 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-370P-201ENST00000411008 104 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC243428.1-201ENST00000421099 264 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AF228730.4-201ENST00000421457 183 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 RNU2-53P-201ENST00000516257 147 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 COX6CP5-201ENST00000527162 228 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 HSPE1P4-201ENST00000550617 308 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC109446.1-201ENST00000566172 220 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 FRG2DP-202ENST00000566967 323 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC090616.3-201ENST00000582184 217 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 MIR3199-1-201ENST00000582434 88 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC069294.1-201ENST00000608397 350 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 AC046143.2-201ENST00000609789 160 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 MIR203B-201ENST00000636080 86 ntBASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SYNE3Q6ZMZ3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 SNORA67.4-201ENST00000384688 142 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 MIR95-201ENST00000385072 81 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-220P-201ENST00000390919 107 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 RNY4P36-201ENST00000391116 96 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.632-201ENST00000459189 102 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 SNORD19B-201ENST00000459623 84 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 HMGB1P35-201ENST00000503360 598 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AC109329.2-201ENST00000519658 482 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AC021231.3-201ENST00000558497 370 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 MIR4795-201ENST00000584182 89 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AL713866.2-201ENST00000603579 219 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AL356280.1-201ENST00000603614 379 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AC009229.3-201ENST00000608056 282 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AL669831.3-213ENST00000636676 183 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 MTND4P27-201ENST00000450813 1354 ntBASIC2.74□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-212P-201ENST00000362642 104 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.384-201ENST00000383909 102 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.404-201ENST00000383978 102 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 MIR524-201ENST00000385242 87 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 SNORA75.4-201ENST00000391278 119 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 RPS26P42-201ENST00000413485 326 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 USMG5P1-201ENST00000425964 177 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 AL513124.1-201ENST00000450410 614 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 ELOCP24-201ENST00000456370 334 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 AC104564.1-201ENST00000493028 407 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 AC005741.1-201ENST00000511094 432 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 SNORA31.11-201ENST00000516528 139 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.718-201ENST00000517110 102 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 AL078605.1-201ENST00000603529 500 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 AC005520.5-201ENST00000613926 164 ntBASIC2.73□□□□□ -1.97
SYNE3Q6ZMZ3 MTND5P9-201ENST00000503854 1755 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-142P-201ENST00000384019 107 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.490-201ENST00000384413 102 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 RPS15AP28-201ENST00000435088 386 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms