Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL358453.1-201ENST00000422522 250 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AL590556.1-201ENST00000423231 483 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AL031659.1-201ENST00000447075 539 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 RPL21P39-201ENST00000463605 483 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC098869.1-201ENST00000481627 292 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC087190.1-201ENST00000484462 480 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC107032.1-201ENST00000485945 480 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC132942.1-201ENST00000486753 483 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC093591.1-201ENST00000491435 481 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 RPL21P16-201ENST00000495531 483 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AP003733.2-201ENST00000529409 171 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 MRPS36P4-201ENST00000534436 298 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AP002770.2-201ENST00000543613 532 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AL442163.3-201ENST00000554110 156 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 LINC00933-203ENST00000559812 219 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 RPS29P30-201ENST00000600975 111 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC093732.2-201ENST00000607950 274 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC004832.5-201ENST00000608677 401 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 MIR6076-201ENST00000617521 113 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC243829.7-201ENST00000633081 225 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC241585.2-209ENST00000638217 143 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 Z75746.1-201ENST00000440243 2080 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 RNU1-76P-201ENST00000362903 159 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 RNU6-270P-201ENST00000364131 105 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 RNU6-658P-201ENST00000384606 106 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 MIR628-201ENST00000385229 95 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 AL512633.1-201ENST00000399931 655 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 TMEM167AP1-201ENST00000423409 219 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 AC243964.1-201ENST00000441814 261 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 AL513124.1-201ENST00000450410 614 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 AC091874.1-201ENST00000511402 339 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 RNU6-1023P-201ENST00000516137 106 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 SNORA40.15-201ENST00000516884 107 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 RPL23AP78-201ENST00000599928 470 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 AC096772.1-201ENST00000609146 564 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 AP001282.2-201ENST00000616149 309 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 MIR6134-201ENST00000617606 109 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 AC097372.5-201ENST00000623665 376 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 U6.92-201ENST00000636464 89 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF549Q6P9A3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 SNORD32A-201ENST00000364805 84 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 RNY3P4-201ENST00000384428 101 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 SNORA1.3-201ENST00000384676 136 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AL138827.1-201ENST00000402666 306 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 MIR548I3-201ENST00000408378 149 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 MIR548I1-201ENST00000408810 149 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 RPL26P27-201ENST00000414397 437 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 RPL30P1-201ENST00000488676 339 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 RNU6-570P-201ENST00000517051 105 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 RNU6-711P-201ENST00000517255 106 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AP004607.1-201ENST00000524456 203 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC007536.1-201ENST00000533382 349 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC007375.1-201ENST00000554513 578 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC136932.1-201ENST00000574771 208 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC011471.1-201ENST00000585766 187 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC012433.1-201ENST00000588916 398 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC022336.2-201ENST00000568966 2538 ntBASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.84-201ENST00000363011 104 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 RNU1-100P-201ENST00000365255 165 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 MIR215-201ENST00000384858 110 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 SNORD115-46-201ENST00000390982 71 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 RNA5SP213-201ENST00000391031 106 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 RPS4XP3-201ENST00000398541 413 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 1180.3 ms