Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 SNRPGP19-201ENST00000603826 189 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AC090517.2-201ENST00000614966 680 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AL136221.1-201ENST00000621449 509 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AP000553.5-201ENST00000641933 54 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 Y_RNA.373-201ENST00000365600 103 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 RNU6-877P-201ENST00000383868 107 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 MIR504-201ENST00000385065 83 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 MIR1294-201ENST00000408503 142 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 RNA5SP201-201ENST00000410316 124 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 SRIP3-201ENST00000413200 219 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 IPO7P1-201ENST00000442031 636 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AC245102.2-201ENST00000448956 180 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 RPS29P27-201ENST00000463711 170 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AC104564.1-201ENST00000493028 407 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AC145146.1-201ENST00000496370 254 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 RNA5SP182-201ENST00000516064 82 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 SNORA31.16-201ENST00000516773 139 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AC107953.1-201ENST00000522216 297 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AC026371.1-201ENST00000551867 419 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AC104984.5-201ENST00000586878 94 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AL031274.2-201ENST00000599419 203 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AC068944.2-201ENST00000610373 403 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 RMST_3.1-201ENST00000611651 109 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AC063943.3-201ENST00000615562 356 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 MIR6715A-201ENST00000615929 79 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 AL450472.1-202ENST00000637286 180 ntBASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC30Q5VVM6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AL356292.1-201ENST00000283110 373 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 RNU6-534P-201ENST00000364877 106 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 RNU4-52P-201ENST00000384209 138 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 SNORA46.1-201ENST00000391069 153 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 RNU6-332P-201ENST00000391193 108 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 HMGN2P39-201ENST00000398005 273 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AL645568.3-201ENST00000433683 316 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 GPM6BP3-201ENST00000442797 145 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 MTCO1P29-201ENST00000496868 288 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 FAM206BP-201ENST00000510179 541 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AC091874.1-201ENST00000511402 339 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 RNU6-1332P-201ENST00000516666 104 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 MIR4529-201ENST00000578110 78 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 CPDP1-201ENST00000579660 283 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AC078795.3-201ENST00000602913 472 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 AC005520.5-201ENST00000613926 164 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 SNORA43.4-201ENST00000629559 138 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 MIR3688-2-201ENST00000636963 87 ntBASIC2.47□□□□□ -2.01
CCDC30Q5VVM6 U3.40-201ENST00000408706 208 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 UBE2V1P8-201ENST00000437166 265 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 AMD1P1-201ENST00000457220 922 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 RNU6-717P-201ENST00000459076 104 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 AC007547.1-201ENST00000462177 490 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 AC110588.1-201ENST00000559699 137 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 CYP4A27P-201ENST00000567218 190 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 RPS3AP23-202ENST00000574601 686 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 AL078605.1-201ENST00000603529 500 ntBASIC2.46□□□□□ -2.02
CCDC30Q5VVM6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 AC009541.1-201ENST00000438279 2662 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 Y_RNA.157-201ENST00000363638 102 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 RNU6-1317P-201ENST00000364582 104 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 Y_RNA.453-201ENST00000384223 109 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 MIR29C-201ENST00000385231 88 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 AL030996.1-201ENST00000411430 235 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 PRELID3BP1-201ENST00000457142 540 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 RNU7-66P-201ENST00000459469 62 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 RPS29P25-201ENST00000481709 171 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 AC107032.1-201ENST00000485945 480 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 RNU2-19P-201ENST00000517288 84 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 Z98751.3-201ENST00000604447 521 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms