Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 AC016588.2-201ENST00000632484 3021 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VARS2Q5ST30 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.92□□□□□ -1.62
VARS2Q5ST30 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VARS2Q5ST30 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 RNU6-117P-201ENST00000365415 107 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 RNU6-629P-201ENST00000384061 103 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 RNU6-987P-201ENST00000384759 104 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 MIR181A2-201ENST00000384863 110 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 MIR659-201ENST00000384963 97 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 RNU6-750P-201ENST00000390946 107 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 AC009237.10-201ENST00000414112 510 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.92□□□□□ -1.62
VARS2Q5ST30 SNORD65B-201ENST00000459126 73 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 snoU13.22-201ENST00000459428 104 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 SNORA31.20-201ENST00000517111 133 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.92□□□□□ -1.62
VARS2Q5ST30 HSPE1P7-201ENST00000604681 321 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 U6.73-201ENST00000619194 103 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 AC091304.10-201ENST00000641554 121 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.92□□□□□ -1.62
VARS2Q5ST30 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.92□□□□□ -1.62
VARS2Q5ST30 DHX9P1-201ENST00000436565 3076 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 AC004925.1-201ENST00000624256 2706 ntBASIC4.92□□□□□ -1.62
VARS2Q5ST30 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.92□□□□□ -1.62
VARS2Q5ST30 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VARS2Q5ST30 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.91□□□□□ -1.62
VARS2Q5ST30 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 AC091564.4-201ENST00000533934 2194 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.91□□□□□ -1.62
VARS2Q5ST30 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
VARS2Q5ST30 AC058791.1-201ENST00000608412 3198 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 Y_RNA.191-201ENST00000363972 113 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 SNORA18-201ENST00000384416 132 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VARS2Q5ST30 SNORA11F-201ENST00000408237 128 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 AC009238.1-201ENST00000442165 424 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 AC009237.6-201ENST00000446969 424 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 RNU7-6P-201ENST00000516845 62 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 MIR2116-201ENST00000517221 80 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 ZYXP1-201ENST00000617638 118 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 AP005019.3-201ENST00000620418 560 ntBASIC4.91□□□□□ -1.62
VARS2Q5ST30 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.91□□□□□ -1.62
VARS2Q5ST30 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.91□□□□□ -1.62
VARS2Q5ST30 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VARS2Q5ST30 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VARS2Q5ST30 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VARS2Q5ST30 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.9□□□□□ -1.62
VARS2Q5ST30 RNA5SP28-201ENST00000363841 119 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 RN7SKP280-201ENST00000364196 304 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 RNA5SP509-201ENST00000364577 119 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 MIR548A2-201ENST00000384956 97 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 RPS12P18-201ENST00000442381 270 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 RNA5SP249-201ENST00000516127 99 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 ACA59.2-201ENST00000517061 156 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 AC107918.3-201ENST00000533272 382 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.9□□□□□ -1.63
VARS2Q5ST30 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VARS2Q5ST30 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VARS2Q5ST30 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VARS2Q5ST30 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.9□□□□□ -1.63
VARS2Q5ST30 AC107027.3-201ENST00000565095 3473 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VARS2Q5ST30 AC022893.2-201ENST00000564832 3296 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VARS2Q5ST30 AC010889.1-201ENST00000566193 2666 ntBASIC4.9□□□□□ -1.63
VARS2Q5ST30 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.89□□□□□ -1.63
VARS2Q5ST30 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.89□□□□□ -1.63
VARS2Q5ST30 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
VARS2Q5ST30 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VARS2Q5ST30 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARS2Q5ST30 RNU1-108P-201ENST00000362556 161 ntBASIC4.89□□□□□ -1.63
VARS2Q5ST30 SNORD45B-201ENST00000364617 72 ntBASIC4.89□□□□□ -1.63
VARS2Q5ST30 SNORA70C-201ENST00000384538 135 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms