Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.06□□□□□ -1.92
KHDC1Q4VXA5 MIR3923-201ENST00000579521 83 ntBASIC3.06□□□□□ -1.92
KHDC1Q4VXA5 AL138963.2-201ENST00000605137 226 ntBASIC3.06□□□□□ -1.92
KHDC1Q4VXA5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.06□□□□□ -1.92
KHDC1Q4VXA5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AC073325.2-201ENST00000339545 159 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 SNORD115-8-201ENST00000363856 82 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 SNORD115-38-201ENST00000365037 82 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 RNU6-541P-201ENST00000384709 110 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 CBX3P9-201ENST00000402326 552 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 SEM1P1-201ENST00000506694 209 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 RNU2-53P-201ENST00000516257 147 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 RNU6-1046P-201ENST00000516538 107 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AC040926.1-201ENST00000530195 238 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AC007536.1-201ENST00000533382 349 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AC124312.5-201ENST00000604451 268 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AL034555.1-201ENST00000604816 211 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AC005520.5-201ENST00000613926 164 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AL078596.1-201ENST00000624856 447 ntBASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
KHDC1Q4VXA5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 SNORD15B-201ENST00000384714 146 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 SNORA48.2-201ENST00000390926 124 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 AL139281.1-201ENST00000422120 335 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 EIF4EP4-201ENST00000424916 578 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 MICF-203ENST00000432679 129 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 MTCO3P8-201ENST00000453691 755 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 RPS3P1-201ENST00000456781 192 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 snoU13.6-201ENST00000458785 104 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 RN7SL499P-201ENST00000481141 276 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 SNORA74D-201ENST00000516404 141 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 RNU6-58P-201ENST00000517143 103 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 AC027288.2-201ENST00000553028 243 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 AL442163.3-201ENST00000554110 156 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 AC103810.1-201ENST00000579873 453 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 RPS29P30-201ENST00000600975 111 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 AL133393.1-201ENST00000603277 287 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 AC091953.5-201ENST00000622919 233 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 MIR622-201ENST00000638396 96 ntBASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
KHDC1Q4VXA5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC108206.1-201ENST00000570186 4159 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RNU6-486P-201ENST00000363116 107 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 Y_RNA.133-201ENST00000363428 110 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 SNORA68.1-201ENST00000364537 132 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RNU6-450P-201ENST00000364654 107 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 Y_RNA.319-201ENST00000365138 92 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 SNORA63.7-201ENST00000365579 123 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RNU6-1105P-201ENST00000384774 107 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 MIR128-1-201ENST00000384921 82 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 MIR23A-201ENST00000385245 73 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RNU1-139P-201ENST00000391307 165 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RPL21P75-201ENST00000396599 483 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RPL21P28-201ENST00000401418 483 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AL356057.3-201ENST00000402607 340 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 MIR1252-201ENST00000408861 65 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AL590556.1-201ENST00000423231 483 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 USP9YP16-201ENST00000430287 407 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RPL23AP83-201ENST00000434984 473 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 MTND3P2-201ENST00000438452 342 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 USP9YP23-201ENST00000455085 407 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 U8.20-201ENST00000459445 131 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC091179.1-201ENST00000461606 579 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RPL21P39-201ENST00000463605 483 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AP000870.1-201ENST00000472927 406 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC087190.1-201ENST00000484462 480 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC107032.1-201ENST00000485945 480 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC132942.1-201ENST00000486753 483 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC093591.1-201ENST00000491435 481 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RPL21P16-201ENST00000495531 483 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 SNORA25.11-201ENST00000515935 105 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RNA5SP341-201ENST00000516261 117 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 RNA5SP54-201ENST00000516951 92 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AL117187.1-201ENST00000555482 181 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 AL355297.3-201ENST00000604082 446 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.03□□□□□ -1.92
KHDC1Q4VXA5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
KHDC1Q4VXA5 AC010329.5-201ENST00000623497 2174 ntBASIC3.02□□□□□ -1.93
KHDC1Q4VXA5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
KHDC1Q4VXA5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
KHDC1Q4VXA5 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms