Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNA5SP76-201ENST00000516277 87 ntBASIC3.2□□□□□ -1.9
LONRF3Q496Y0 RNA5SP367-201ENST00000516557 118 ntBASIC3.2□□□□□ -1.9
LONRF3Q496Y0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.2□□□□□ -1.9
LONRF3Q496Y0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.2□□□□□ -1.9
LONRF3Q496Y0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.2□□□□□ -1.9
LONRF3Q496Y0 AP001836.1-201ENST00000604675 523 ntBASIC3.2□□□□□ -1.9
LONRF3Q496Y0 AC083806.3-201ENST00000614016 455 ntBASIC3.2□□□□□ -1.9
LONRF3Q496Y0 AC007485.1-201ENST00000616755 206 ntBASIC3.2□□□□□ -1.9
LONRF3Q496Y0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LONRF3Q496Y0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AC131280.1-202ENST00000624067 4211 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 SNORD50.1-201ENST00000362987 71 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 SNORA63C-201ENST00000364578 129 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 Y_RNA.428-201ENST00000384078 102 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 RNU6-738P-201ENST00000384531 106 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AP000275.1-201ENST00000411943 390 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 CYCSP48-201ENST00000417124 323 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AC008267.5-201ENST00000424928 265 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AC243964.1-201ENST00000441814 261 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AL139109.1-201ENST00000455491 297 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AC003982.1-202ENST00000469928 248 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 HMGN1P10-201ENST00000474557 553 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 RPL30P12-201ENST00000474666 353 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 RPL17P19-201ENST00000489069 552 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 SNORA31.23-201ENST00000517219 133 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AC107016.2-201ENST00000547968 190 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 SUB1P3-201ENST00000564581 315 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AL359198.2-201ENST00000611836 194 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.19□□□□□ -1.9
LONRF3Q496Y0 AC091925.1-201ENST00000623204 462 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 MTND5P9-201ENST00000503854 1755 ntBASIC3.19□□□□□ -1.9
LONRF3Q496Y0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LONRF3Q496Y0 MTND4P1-201ENST00000457501 1466 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 RNY1P16-201ENST00000363063 111 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 Y_RNA.123-201ENST00000363338 102 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 SNORA67.1-201ENST00000364749 141 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 RNU6-639P-201ENST00000384074 107 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 RNY1P14-201ENST00000384426 108 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 RNU1-57P-201ENST00000384491 166 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 RNU6-1160P-201ENST00000384546 104 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 MIR524-201ENST00000385242 87 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 RNU2-63P-201ENST00000410792 194 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.18□□□□□ -1.9
LONRF3Q496Y0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.18□□□□□ -1.9
LONRF3Q496Y0 MRPS18CP6-201ENST00000423587 223 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AL160004.2-201ENST00000432935 350 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.18□□□□□ -1.9
LONRF3Q496Y0 RNU6-1045P-201ENST00000516321 107 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 SNORD116.3-201ENST00000517176 78 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AC027176.1-201ENST00000560204 514 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 MIR5696-201ENST00000578474 85 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AL355802.3-201ENST00000607571 545 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AC009318.2-201ENST00000610917 651 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AC006157.1-201ENST00000611750 366 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 FO624990.1-201ENST00000636373 85 ntBASIC3.18□□□□□ -1.9
LONRF3Q496Y0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LONRF3Q496Y0 AC096644.4-201ENST00000563417 2912 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 ZNF299P-201ENST00000406845 1804 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 RNU6-99P-201ENST00000364721 107 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 RNA5SP125-201ENST00000364843 120 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 RNU6-1032P-201ENST00000384100 107 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 RNU1-52P-201ENST00000384190 164 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 RNU6-784P-201ENST00000384330 106 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 BTF3L4P2-201ENST00000392798 346 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 SNORD88.1-201ENST00000408684 91 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC007969.2-201ENST00000441891 191 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC108938.1-201ENST00000451204 136 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 GSTA11P-201ENST00000452866 669 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC079354.2-201ENST00000453523 154 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC090515.1-201ENST00000465295 476 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC083906.5-201ENST00000503722 328 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AL670379.2-201ENST00000604983 252 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC116312.1-201ENST00000606841 314 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 MIR5739-201ENST00000619803 80 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 AC024581.2-201ENST00000619986 252 ntBASIC3.17□□□□□ -1.9
LONRF3Q496Y0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.17□□□□□ -1.9
LONRF3Q496Y0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
LONRF3Q496Y0 RNU6-487P-201ENST00000365430 104 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.16□□□□□ -1.9
LONRF3Q496Y0 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AC105272.1-201ENST00000438604 198 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AC099799.1-201ENST00000439809 192 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 SNRPGP7-201ENST00000469016 106 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AC105758.1-201ENST00000506038 399 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 257.3 ms