Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC063976.3-201ENST00000426849 329 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 CR769767.1-201ENST00000436337 346 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC006026.2-201ENST00000457376 180 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC022447.4-201ENST00000504053 364 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC116655.1-201ENST00000508324 901 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 RNU6-1045P-201ENST00000516321 107 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 RNU6-612P-201ENST00000516909 102 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 CBX3P8-201ENST00000532412 525 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 SUB1P3-201ENST00000564581 315 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 MIR4273-201ENST00000582824 84 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AL355802.3-201ENST00000607571 545 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC005014.2-201ENST00000607795 599 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC069294.1-201ENST00000608397 350 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 Y_RNA.48-201ENST00000362710 103 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 RNA5SP125-201ENST00000364843 120 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 MIR521-1-201ENST00000384902 87 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 CYCSP48-201ENST00000417124 323 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 MCFD2P1-201ENST00000417812 300 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 EIF4EP2-201ENST00000422816 654 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC008267.5-201ENST00000424928 265 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC108938.1-201ENST00000451204 136 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AL441985.1-201ENST00000457727 251 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 FO393415.2-201ENST00000480085 343 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC114801.2-201ENST00000503825 781 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 RNA5SP82-201ENST00000516707 92 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 ACA59.2-201ENST00000517061 156 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 RNU6-264P-201ENST00000517134 104 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 CR383656.8-201ENST00000549046 145 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 MIR5696-201ENST00000578474 85 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC105245.1-201ENST00000581934 244 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.17□□□□□ -2.06
SNAI3Q3KNW1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AL365361.1-201ENST00000566942 3481 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RNU6-227P-201ENST00000362865 103 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 SNORD50.1-201ENST00000362987 71 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RNU6-486P-201ENST00000363116 107 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RNU6-639P-201ENST00000384074 107 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RNY1P14-201ENST00000384426 108 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AL133475.1-201ENST00000404414 305 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 FTH1P15-201ENST00000406984 280 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RNA5SP181-201ENST00000410246 98 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RPL23AP50-201ENST00000434149 455 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RPL17P19-201ENST00000489069 552 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RNA5SP112-201ENST00000515937 99 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RNA5SP320-201ENST00000516263 124 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RNU6-1137P-201ENST00000517073 99 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 SNORD116.3-201ENST00000517176 78 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AP000889.1-201ENST00000530968 660 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 BNIP3P16-201ENST00000589779 534 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AL158827.2-201ENST00000602494 330 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AC083806.3-201ENST00000614016 455 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AC007485.1-201ENST00000616755 206 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AL449363.1-201ENST00000617815 186 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 AL691447.3-201ENST00000635020 330 ntBASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SNAI3Q3KNW1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 RNA5SP456-201ENST00000364002 114 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 RNU1-115P-201ENST00000365329 160 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AC117470.1-201ENST00000381974 330 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms