Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC073413.2-201ENST00000604332 360 ntBASIC1.03□□□□□ -2.24
SSX1Q16384 AC002044.1-201ENST00000606707 158 ntBASIC1.03□□□□□ -2.24
SSX1Q16384 AC024933.1-201ENST00000608472 348 ntBASIC1.03□□□□□ -2.24
SSX1Q16384 AC006566.1-201ENST00000608943 513 ntBASIC1.03□□□□□ -2.24
SSX1Q16384 MIR8063-201ENST00000621930 81 ntBASIC1.03□□□□□ -2.24
SSX1Q16384 ICE2P2-201ENST00000483823 2787 ntBASIC1.03□□□□□ -2.24
SSX1Q16384 AC010615.1-201ENST00000594254 1764 ntBASIC1.03□□□□□ -2.24
SSX1Q16384 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.25
SSX1Q16384 AC100821.1-201ENST00000523153 2479 ntBASIC1.03□□□□□ -2.25
SSX1Q16384 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SSX1Q16384 RNU6-862P-201ENST00000362804 105 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 MIR23A-201ENST00000385245 73 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 MIR548B-201ENST00000385247 97 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.02□□□□□ -2.25
SSX1Q16384 AC013410.2-201ENST00000422627 201 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.02□□□□□ -2.25
SSX1Q16384 RPS27P16-201ENST00000425758 201 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 TOMM22P2-201ENST00000430735 237 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC027119.1-201ENST00000440877 241 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 ATP5J2P3-201ENST00000451550 258 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 RNA5SP269-201ENST00000459032 137 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC010531.2-201ENST00000465012 153 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 RPL36AP21-201ENST00000490372 323 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.02□□□□□ -2.25
SSX1Q16384 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.02□□□□□ -2.25
SSX1Q16384 AK3P2-201ENST00000507976 429 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 MTND1P22-201ENST00000510572 951 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.02□□□□□ -2.25
SSX1Q16384 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.02□□□□□ -2.25
SSX1Q16384 RNU5F-4P-201ENST00000516581 114 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 RNU6-759P-201ENST00000516740 103 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 SNORD60.2-201ENST00000516883 86 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.02□□□□□ -2.25
SSX1Q16384 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SSX1Q16384 AC021231.3-201ENST00000558497 370 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 MTCO3P23-201ENST00000561363 289 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.02□□□□□ -2.25
SSX1Q16384 CYP4A27P-201ENST00000567218 190 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AGGF1P4-201ENST00000568249 801 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC023043.2-201ENST00000589678 1026 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 Z98751.3-201ENST00000604447 521 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC069114.2-201ENST00000604699 304 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC122133.1-201ENST00000613964 233 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AC083806.3-201ENST00000614016 455 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AL121890.5-201ENST00000620848 304 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 AF246928.1-201ENST00000623768 87 ntBASIC1.02□□□□□ -2.25
SSX1Q16384 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
SSX1Q16384 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.01□□□□□ -2.25
SSX1Q16384 RNU1-76P-201ENST00000362903 159 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 RNU6-1019P-201ENST00000364424 107 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 RNU6-297P-201ENST00000384636 107 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.01□□□□□ -2.25
SSX1Q16384 MTCO1P21-201ENST00000416634 589 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 EBAG9P1-201ENST00000418955 543 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 MTCO2P34-201ENST00000421994 607 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 FTH1P12-201ENST00000432137 551 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC002486.1-201ENST00000435098 391 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AL135790.2-201ENST00000437701 267 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC007395.1-201ENST00000451333 677 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.01□□□□□ -2.25
SSX1Q16384 snoU13.30-201ENST00000458951 104 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 HMGN2P9-201ENST00000476875 229 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 RN7SL429P-201ENST00000479090 223 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 RN7SL489P-201ENST00000486185 223 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 RN7SL327P-201ENST00000488659 223 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC008628.2-201ENST00000502605 298 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC079140.5-201ENST00000507882 310 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC079140.3-201ENST00000511111 550 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.01□□□□□ -2.25
SSX1Q16384 AC012414.6-201ENST00000568241 401 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
SSX1Q16384 RSL24D1P11-201ENST00000591045 491 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC245014.2-201ENST00000603689 287 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AP001836.1-201ENST00000604675 523 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC064872.1-201ENST00000604823 1072 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC246785.4-201ENST00000605374 287 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 AC005520.5-201ENST00000613926 164 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 RN7SL853P-201ENST00000617250 223 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 SNORA43.4-201ENST00000629559 138 ntBASIC1.01□□□□□ -2.25
SSX1Q16384 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.01□□□□□ -2.25
SSX1Q16384 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
SSX1Q16384 RNU6-266P-201ENST00000364225 107 ntBASIC1□□□□□ -2.25
SSX1Q16384 SNORA63D-201ENST00000364359 132 ntBASIC1□□□□□ -2.25
SSX1Q16384 Y_RNA.255-201ENST00000364581 97 ntBASIC1□□□□□ -2.25
SSX1Q16384 RNU6-282P-201ENST00000365357 103 ntBASIC1□□□□□ -2.25
SSX1Q16384 SNORA36A-201ENST00000384221 132 ntBASIC1□□□□□ -2.25
SSX1Q16384 Y_RNA.504-201ENST00000384481 104 ntBASIC1□□□□□ -2.25
SSX1Q16384 MIR1289-2-201ENST00000408360 111 ntBASIC1□□□□□ -2.25
SSX1Q16384 RNU2-7P-201ENST00000410794 178 ntBASIC1□□□□□ -2.25
SSX1Q16384 AL161935.2-201ENST00000414627 60 ntBASIC1□□□□□ -2.25
SSX1Q16384 TRAPPC2P8-201ENST00000440676 396 ntBASIC1□□□□□ -2.25
SSX1Q16384 TRAPPC2P3-201ENST00000443200 321 ntBASIC1□□□□□ -2.25
SSX1Q16384 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1□□□□□ -2.25
SSX1Q16384 OR2AQ1P-201ENST00000451972 200 ntBASIC1□□□□□ -2.25
SSX1Q16384 SCARNA18-201ENST00000459004 134 ntBASIC1□□□□□ -2.25
SSX1Q16384 SNORD42A-201ENST00000459584 64 ntBASIC1□□□□□ -2.25
SSX1Q16384 GMFBP1-201ENST00000467831 427 ntBASIC1□□□□□ -2.25
SSX1Q16384 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms