Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 MIR181A1-201ENST00000385026 110 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.02□□□□□ -2.09
GABPAQ06546 SNAP23P1-201ENST00000433229 246 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 RPS27P21-201ENST00000486977 252 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 RPL39P5-202ENST00000512505 151 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.02□□□□□ -2.09
GABPAQ06546 Y_RNA.655-201ENST00000515919 96 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 RN7SKP256-201ENST00000517201 314 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 AC034114.1-201ENST00000520293 285 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 AC104576.1-201ENST00000524225 88 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 GNAI2P1-201ENST00000541815 315 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.02□□□□□ -2.09
GABPAQ06546 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.02□□□□□ -2.09
GABPAQ06546 AL157687.1-201ENST00000554853 619 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.02□□□□□ -2.09
GABPAQ06546 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.02□□□□□ -2.09
GABPAQ06546 AC064836.2-201ENST00000609491 462 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 FER-210ENST00000628534 558 ntTSL 5 BASIC2.02□□□□□ -2.09
GABPAQ06546 SNORD98-201ENST00000636377 67 ntBASIC2.02□□□□□ -2.09
GABPAQ06546 RNU6-743P-201ENST00000364151 106 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 SNORD48-201ENST00000364953 64 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 EIF4E2P1-201ENST00000393781 255 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 USP9YP18-201ENST00000425912 695 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.01□□□□□ -2.09
GABPAQ06546 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.01□□□□□ -2.09
GABPAQ06546 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.01□□□□□ -2.09
GABPAQ06546 AC022447.4-201ENST00000504053 364 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.01□□□□□ -2.09
GABPAQ06546 AC107953.1-201ENST00000522216 297 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 MTND1P35-201ENST00000526739 508 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 AP005597.4-201ENST00000526762 229 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 EIF1P4-201ENST00000572664 335 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.01□□□□□ -2.09
GABPAQ06546 AP001836.1-201ENST00000604675 523 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 AL034555.1-201ENST00000604816 211 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.01□□□□□ -2.09
GABPAQ06546 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.01□□□□□ -2.09
GABPAQ06546 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
GABPAQ06546 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.01□□□□□ -2.09
GABPAQ06546 SNORD32A-201ENST00000364805 84 ntBASIC2□□□□□ -2.09
GABPAQ06546 U8.10-201ENST00000384260 133 ntBASIC2□□□□□ -2.09
GABPAQ06546 Y_RNA.504-201ENST00000384481 104 ntBASIC2□□□□□ -2.09
GABPAQ06546 MIR450B-201ENST00000401182 78 ntBASIC2□□□□□ -2.09
GABPAQ06546 Y_RNA.615-201ENST00000410769 117 ntBASIC2□□□□□ -2.09
GABPAQ06546 AC078809.1-201ENST00000427601 140 ntBASIC2□□□□□ -2.09
GABPAQ06546 SRIP2-201ENST00000428470 166 ntBASIC2□□□□□ -2.09
GABPAQ06546 C8orf59P1-201ENST00000429930 303 ntBASIC2□□□□□ -2.09
GABPAQ06546 MRPS10P2-201ENST00000431226 381 ntBASIC2□□□□□ -2.09
GABPAQ06546 GPM6BP3-201ENST00000442797 145 ntBASIC2□□□□□ -2.09
GABPAQ06546 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2□□□□□ -2.09
GABPAQ06546 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2□□□□□ -2.09
GABPAQ06546 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2□□□□□ -2.09
GABPAQ06546 AC091435.1-201ENST00000505442 584 ntBASIC2□□□□□ -2.09
GABPAQ06546 SNORA31.16-201ENST00000516773 139 ntBASIC2□□□□□ -2.09
GABPAQ06546 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
GABPAQ06546 AC233702.2-202ENST00000562547 291 ntBASIC2□□□□□ -2.09
GABPAQ06546 AC104581.2-201ENST00000572227 430 ntBASIC2□□□□□ -2.09
GABPAQ06546 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2□□□□□ -2.09
GABPAQ06546 MIR3136-201ENST00000583498 78 ntBASIC2□□□□□ -2.09
GABPAQ06546 AL031274.2-201ENST00000599419 203 ntBASIC2□□□□□ -2.09
GABPAQ06546 AL356157.2-201ENST00000605122 111 ntBASIC2□□□□□ -2.09
GABPAQ06546 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
GABPAQ06546 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
GABPAQ06546 Y_RNA.9-201ENST00000362354 101 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 RNU6-661P-201ENST00000362409 107 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 RNU4-15P-201ENST00000362613 141 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 Y_RNA.167-201ENST00000363735 109 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 RNU4-56P-201ENST00000364700 142 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 RNU6-1329P-201ENST00000365664 107 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 Y_RNA.402-201ENST00000383972 102 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 RNU6-142P-201ENST00000384019 107 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 RNU6-214P-201ENST00000384130 107 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 RNU6-1215P-201ENST00000384441 102 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 Y_RNA.516-201ENST00000384541 124 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 AL359672.1-201ENST00000442302 409 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.99□□□□□ -2.09
GABPAQ06546 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.99□□□□□ -2.09
GABPAQ06546 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.99□□□□□ -2.09
GABPAQ06546 RPL9P9-202ENST00000466501 579 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 AC145146.1-201ENST00000496370 254 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 AC008628.2-201ENST00000502605 298 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 AC091874.1-201ENST00000511402 339 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 RNU6-1332P-201ENST00000516666 104 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.99□□□□□ -2.09
GABPAQ06546 AC022616.8-201ENST00000533569 253 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 NDUFA5P6-201ENST00000542110 379 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 AC026271.5-201ENST00000577873 130 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
GABPAQ06546 AC018889.1-201ENST00000605372 397 ntBASIC1.99□□□□□ -2.09
GABPAQ06546 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
GABPAQ06546 AP000560.1-201ENST00000624150 1937 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 RNY3P3-201ENST00000363816 102 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 RNU6-522P-201ENST00000364497 107 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 RNU4-12P-201ENST00000365233 139 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
GABPAQ06546 RNU6-332P-201ENST00000391193 108 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 BTF3L4P2-201ENST00000392798 346 ntBASIC1.98□□□□□ -2.09
GABPAQ06546 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms