Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.26□□□□□ -2.05
CDK3Q00526 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.26□□□□□ -2.05
CDK3Q00526 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.26□□□□□ -2.05
CDK3Q00526 Z98751.3-201ENST00000604447 521 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CDK3Q00526 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDK3Q00526 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDK3Q00526 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.25□□□□□ -2.05
CDK3Q00526 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CDK3Q00526 MIR548F5-201ENST00000408421 86 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 RN7SKP158-201ENST00000410453 326 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
CDK3Q00526 OOSP1P1-201ENST00000423265 274 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.25□□□□□ -2.05
CDK3Q00526 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.25□□□□□ -2.05
CDK3Q00526 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.25□□□□□ -2.05
CDK3Q00526 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.25□□□□□ -2.05
CDK3Q00526 MTND5P5-201ENST00000503764 376 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 AC021146.2-201ENST00000504736 556 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.25□□□□□ -2.05
CDK3Q00526 ACA59.1-201ENST00000515966 143 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 SNORA20.3-201ENST00000516880 132 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 RNU1-54P-201ENST00000517181 120 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.25□□□□□ -2.05
CDK3Q00526 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.25□□□□□ -2.05
CDK3Q00526 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDK3Q00526 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.25□□□□□ -2.05
CDK3Q00526 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.25□□□□□ -2.05
CDK3Q00526 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.25□□□□□ -2.05
CDK3Q00526 MIR3923-201ENST00000579521 83 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 MIR6128-201ENST00000615528 109 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 MIR6766-201ENST00000622641 72 ntBASIC2.25□□□□□ -2.05
CDK3Q00526 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CDK3Q00526 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDK3Q00526 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDK3Q00526 MIR6073-201ENST00000352083 89 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 RNU6-968P-201ENST00000384076 107 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 RNU6-784P-201ENST00000384330 106 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 RN7SKP223-201ENST00000410582 62 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 RNU2-32P-201ENST00000411193 191 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 RN7SKP192-201ENST00000411291 327 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 AC098614.3-201ENST00000438957 440 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.24□□□□□ -2.05
CDK3Q00526 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.24□□□□□ -2.05
CDK3Q00526 RNU1-41P-201ENST00000516161 162 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 RNU1-48P-201ENST00000516400 162 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 RNU6-567P-201ENST00000516746 107 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.24□□□□□ -2.05
CDK3Q00526 MRPS36P4-201ENST00000534436 298 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 AC022306.2-201ENST00000617563 647 ntBASIC2.24□□□□□ -2.05
CDK3Q00526 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
CDK3Q00526 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDK3Q00526 U8.2-201ENST00000363156 134 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 SNORA25B-201ENST00000365507 128 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 RNU6-1286P-201ENST00000383871 107 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 RNU6-546P-201ENST00000383991 107 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 SNORA29-201ENST00000384183 140 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 MIR221-201ENST00000385135 110 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 SNORA46.1-201ENST00000391069 153 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 SNORA12-201ENST00000391162 147 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 MIR548K-201ENST00000408406 116 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 RNA5SP181-201ENST00000410246 98 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 AC074085.1-201ENST00000413598 418 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 PDCL2P1-201ENST00000419302 352 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 AC012306.1-201ENST00000423267 114 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 FTH1P25-201ENST00000447665 469 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 AL353705.4-201ENST00000449661 238 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 MTND3P10-201ENST00000450967 341 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 AC068781.1-201ENST00000488231 618 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.23□□□□□ -2.05
CDK3Q00526 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.23□□□□□ -2.05
CDK3Q00526 AC103851.1-201ENST00000506833 274 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.23□□□□□ -2.05
CDK3Q00526 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.23□□□□□ -2.05
CDK3Q00526 RNU6-965P-201ENST00000516721 96 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 AC016256.1-201ENST00000547971 354 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 CYP4A27P-201ENST00000567218 190 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 MIR1273D-201ENST00000577266 86 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 AP001094.1-201ENST00000579805 193 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 FGF7P1-201ENST00000582820 288 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 uc_338.5-201ENST00000611839 155 ntBASIC2.23□□□□□ -2.05
CDK3Q00526 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.23□□□□□ -2.05
CDK3Q00526 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CDK3Q00526 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.23□□□□□ -2.05
CDK3Q00526 AC233981.2-201ENST00000611524 1614 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 Y_RNA.166-201ENST00000363730 102 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 Y_RNA.184-201ENST00000363884 108 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 RPS3AP52-201ENST00000435639 297 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.22□□□□□ -2.05
CDK3Q00526 HMGB1P18-201ENST00000438801 619 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 AC107399.1-201ENST00000451226 265 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.22□□□□□ -2.05
CDK3Q00526 snoU13.6-201ENST00000458785 104 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 AC018868.1-201ENST00000491307 315 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 HMGN1P12-201ENST00000499125 195 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms