Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC067942.3-201ENST00000512025 362 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC112206.4-201ENST00000515142 405 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC109479.2-201ENST00000517842 174 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.54□□□□□ -2.32
CCL20P78556 AC023050.3-201ENST00000541142 333 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.54□□□□□ -2.32
CCL20P78556 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.54□□□□□ -2.32
CCL20P78556 CYP4A27P-201ENST00000567218 190 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.54□□□□□ -2.32
CCL20P78556 MIR3973-201ENST00000579824 107 ntBASIC0.54□□□□□ -2.32
CCL20P78556 MIR4742-201ENST00000581069 85 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC009977.1-201ENST00000586015 570 ntBASIC0.54□□□□□ -2.32
CCL20P78556 Z98751.3-201ENST00000604447 521 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC105129.3-201ENST00000605455 485 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC107308.1-201ENST00000615897 301 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AL133216.2-202ENST00000634512 349 ntBASIC0.54□□□□□ -2.32
CCL20P78556 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CCL20P78556 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CCL20P78556 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.53□□□□□ -2.32
CCL20P78556 BX322639.1-202ENST00000423987 2213 ntBASIC0.53□□□□□ -2.32
CCL20P78556 RNU6-545P-201ENST00000362681 104 ntBASIC0.53□□□□□ -2.32
CCL20P78556 SNORA33-201ENST00000363664 130 ntBASIC0.53□□□□□ -2.32
CCL20P78556 Y_RNA.576-201ENST00000384781 102 ntBASIC0.53□□□□□ -2.32
CCL20P78556 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
CCL20P78556 MIR208B-201ENST00000401172 77 ntBASIC0.53□□□□□ -2.32
CCL20P78556 RAB28P5-201ENST00000427490 651 ntBASIC0.53□□□□□ -2.32
CCL20P78556 GTF2IP13-201ENST00000438487 386 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AL031313.1-201ENST00000448435 256 ntBASIC0.53□□□□□ -2.32
CCL20P78556 EXOSC3P1-201ENST00000448649 500 ntBASIC0.53□□□□□ -2.32
CCL20P78556 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.53□□□□□ -2.32
CCL20P78556 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.53□□□□□ -2.32
CCL20P78556 AC016632.1-201ENST00000503994 196 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.53□□□□□ -2.32
CCL20P78556 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.53□□□□□ -2.32
CCL20P78556 RN7SKP49-201ENST00000516675 260 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AC090142.3-201ENST00000519012 385 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AC136628.3-201ENST00000521868 290 ntBASIC0.53□□□□□ -2.32
CCL20P78556 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.53□□□□□ -2.32
CCL20P78556 AC004817.2-201ENST00000561794 651 ntBASIC0.53□□□□□ -2.32
CCL20P78556 MTCO2P2-201ENST00000591258 225 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AC008751.2-201ENST00000597885 980 ntBASIC0.53□□□□□ -2.32
CCL20P78556 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.53□□□□□ -2.32
CCL20P78556 AL359999.1-201ENST00000604513 294 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AL356157.2-201ENST00000605122 111 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AL031775.1-201ENST00000607014 887 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AC021506.2-201ENST00000612354 169 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AL031667.3-201ENST00000620124 655 ntBASIC0.53□□□□□ -2.32
CCL20P78556 AC091895.1-201ENST00000624494 256 ntBASIC0.53□□□□□ -2.32
CCL20P78556 Y_RNA.124-201ENST00000363339 93 ntBASIC0.52□□□□□ -2.33
CCL20P78556 Y_RNA.504-201ENST00000384481 104 ntBASIC0.52□□□□□ -2.33
CCL20P78556 SNORA11.2-201ENST00000408318 127 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.52□□□□□ -2.33
CCL20P78556 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.52□□□□□ -2.33
CCL20P78556 AL133396.1-201ENST00000432048 687 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AC002429.1-201ENST00000437672 148 ntBASIC0.52□□□□□ -2.33
CCL20P78556 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AC048334.1-201ENST00000477975 159 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AC117454.1-201ENST00000491120 168 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AC119751.5-201ENST00000514077 770 ntBASIC0.52□□□□□ -2.33
CCL20P78556 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
CCL20P78556 RNU6-567P-201ENST00000516746 107 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AP003484.1-201ENST00000530974 250 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AC025423.5-201ENST00000550230 219 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.52□□□□□ -2.33
CCL20P78556 AL158827.2-201ENST00000602494 330 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AL929325.1-201ENST00000603096 117 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AC009994.1-201ENST00000606889 253 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AC104010.1-201ENST00000616889 150 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AL691447.3-201ENST00000635020 330 ntBASIC0.52□□□□□ -2.33
CCL20P78556 AL445984.1-201ENST00000637834 659 ntBASIC0.52□□□□□ -2.33
CCL20P78556 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
CCL20P78556 snoU2-30.2-201ENST00000362805 70 ntBASIC0.51□□□□□ -2.33
CCL20P78556 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CCL20P78556 SNORD12-201ENST00000391002 90 ntBASIC0.51□□□□□ -2.33
CCL20P78556 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.51□□□□□ -2.33
CCL20P78556 RPL23AP95-201ENST00000426806 265 ntBASIC0.51□□□□□ -2.33
CCL20P78556 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.51□□□□□ -2.33
CCL20P78556 HSFY7P-201ENST00000432672 318 ntBASIC0.51□□□□□ -2.33
CCL20P78556 SNAP23P1-201ENST00000433229 246 ntBASIC0.51□□□□□ -2.33
CCL20P78556 HSFY8P-201ENST00000437934 318 ntBASIC0.51□□□□□ -2.33
CCL20P78556 AC073614.1-201ENST00000438690 650 ntBASIC0.51□□□□□ -2.33
CCL20P78556 AC034244.1-201ENST00000507687 207 ntBASIC0.51□□□□□ -2.33
CCL20P78556 AF131216.2-201ENST00000512316 564 ntBASIC0.51□□□□□ -2.33
CCL20P78556 AC104136.1-201ENST00000512969 394 ntBASIC0.51□□□□□ -2.33
CCL20P78556 RNU2-34P-201ENST00000516534 121 ntBASIC0.51□□□□□ -2.33
CCL20P78556 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.51□□□□□ -2.33
CCL20P78556 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.51□□□□□ -2.33
CCL20P78556 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.51□□□□□ -2.33
CCL20P78556 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CCL20P78556 VN1R107P-201ENST00000601784 209 ntBASIC0.51□□□□□ -2.33
CCL20P78556 AC064872.1-201ENST00000604823 1072 ntBASIC0.51□□□□□ -2.33
CCL20P78556 AL121992.2-201ENST00000606262 256 ntBASIC0.51□□□□□ -2.33
CCL20P78556 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.51□□□□□ -2.33
CCL20P78556 AL450472.1-202ENST00000637286 180 ntBASIC0.51□□□□□ -2.33
CCL20P78556 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
CCL20P78556 RNU6-1303P-201ENST00000364841 107 ntBASIC0.5□□□□□ -2.33
CCL20P78556 SNORA18.2-201ENST00000383865 132 ntBASIC0.5□□□□□ -2.33
CCL20P78556 SNORA36A-201ENST00000384221 132 ntBASIC0.5□□□□□ -2.33
CCL20P78556 RNU6-950P-201ENST00000384651 107 ntBASIC0.5□□□□□ -2.33
CCL20P78556 MIR200A-201ENST00000384875 90 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms