Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SNORD115-38-201ENST00000365037 82 ntBASIC2.73□□□□□ -1.97
RAE1P78406 Y_RNA.358-201ENST00000365491 99 ntBASIC2.73□□□□□ -1.97
RAE1P78406 SNORD14.1-201ENST00000365609 90 ntBASIC2.73□□□□□ -1.97
RAE1P78406 MIR512-1-201ENST00000384913 84 ntBASIC2.73□□□□□ -1.97
RAE1P78406 RNU6-823P-201ENST00000391042 103 ntBASIC2.73□□□□□ -1.97
RAE1P78406 RNU1-139P-201ENST00000391307 165 ntBASIC2.73□□□□□ -1.97
RAE1P78406 AL590004.2-201ENST00000404787 371 ntBASIC2.73□□□□□ -1.97
RAE1P78406 SNORA11-201ENST00000408789 128 ntBASIC2.73□□□□□ -1.97
RAE1P78406 RNU6-101P-201ENST00000410323 104 ntBASIC2.73□□□□□ -1.97
RAE1P78406 AC114482.1-201ENST00000418010 247 ntBASIC2.73□□□□□ -1.97
RAE1P78406 USP9YP16-201ENST00000430287 407 ntBASIC2.73□□□□□ -1.97
RAE1P78406 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.73□□□□□ -1.97
RAE1P78406 AP000705.1-201ENST00000454567 350 ntBASIC2.73□□□□□ -1.97
RAE1P78406 USP9YP23-201ENST00000455085 407 ntBASIC2.73□□□□□ -1.97
RAE1P78406 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.73□□□□□ -1.97
RAE1P78406 RNU6-1046P-201ENST00000516538 107 ntBASIC2.73□□□□□ -1.97
RAE1P78406 AC040926.1-201ENST00000530195 238 ntBASIC2.73□□□□□ -1.97
RAE1P78406 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.73□□□□□ -1.97
RAE1P78406 AC027288.2-201ENST00000553028 243 ntBASIC2.73□□□□□ -1.97
RAE1P78406 AC005520.5-201ENST00000613926 164 ntBASIC2.73□□□□□ -1.97
RAE1P78406 AL132822.1-201ENST00000617063 513 ntBASIC2.73□□□□□ -1.97
RAE1P78406 AC096644.4-201ENST00000563417 2912 ntBASIC2.73□□□□□ -1.97
RAE1P78406 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.73□□□□□ -1.97
RAE1P78406 MTND5P16-201ENST00000460269 1703 ntBASIC2.73□□□□□ -1.97
RAE1P78406 FAM35CP-201ENST00000554755 2470 ntBASIC2.73□□□□□ -1.97
RAE1P78406 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAE1P78406 OR56A5-201ENST00000340110 738 ntBASIC2.72□□□□□ -1.97
RAE1P78406 RNU6-1159P-201ENST00000362933 107 ntBASIC2.72□□□□□ -1.97
RAE1P78406 Y_RNA.319-201ENST00000365138 92 ntBASIC2.72□□□□□ -1.97
RAE1P78406 Y_RNA.389-201ENST00000383924 113 ntBASIC2.72□□□□□ -1.97
RAE1P78406 SNORA48.5-201ENST00000391143 135 ntBASIC2.72□□□□□ -1.97
RAE1P78406 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.72□□□□□ -1.97
RAE1P78406 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.72□□□□□ -1.97
RAE1P78406 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.72□□□□□ -1.97
RAE1P78406 RNU7-87P-201ENST00000459343 62 ntBASIC2.72□□□□□ -1.97
RAE1P78406 RPS29P26-201ENST00000477483 171 ntBASIC2.72□□□□□ -1.97
RAE1P78406 RNU6-1114P-201ENST00000516022 107 ntBASIC2.72□□□□□ -1.97
RAE1P78406 RNU2-53P-201ENST00000516257 147 ntBASIC2.72□□□□□ -1.97
RAE1P78406 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.72□□□□□ -1.97
RAE1P78406 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.72□□□□□ -1.97
RAE1P78406 AC103810.1-201ENST00000579873 453 ntBASIC2.72□□□□□ -1.97
RAE1P78406 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.72□□□□□ -1.97
RAE1P78406 AL138963.2-201ENST00000605137 226 ntBASIC2.72□□□□□ -1.97
RAE1P78406 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RAE1P78406 AC000403.1-201ENST00000613696 3585 ntBASIC2.72□□□□□ -1.97
RAE1P78406 ZNF72P-201ENST00000425869 1908 ntBASIC2.72□□□□□ -1.97
RAE1P78406 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RAE1P78406 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
RAE1P78406 AC010329.5-201ENST00000623497 2174 ntBASIC2.71□□□□□ -1.97
RAE1P78406 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RAE1P78406 AC092593.1-201ENST00000515413 1815 ntBASIC2.71□□□□□ -1.98
RAE1P78406 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RAE1P78406 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RAE1P78406 RNU6-222P-201ENST00000362438 107 ntBASIC2.71□□□□□ -1.98
RAE1P78406 Y_RNA.380-201ENST00000365663 111 ntBASIC2.71□□□□□ -1.98
RAE1P78406 RPL21P75-201ENST00000396599 483 ntBASIC2.71□□□□□ -1.98
RAE1P78406 RPL21P28-201ENST00000401418 483 ntBASIC2.71□□□□□ -1.98
RAE1P78406 CBX3P9-201ENST00000402326 552 ntBASIC2.71□□□□□ -1.98
RAE1P78406 MIR548F4-201ENST00000408515 105 ntBASIC2.71□□□□□ -1.98
RAE1P78406 MIR1289-1-201ENST00000408836 144 ntBASIC2.71□□□□□ -1.98
RAE1P78406 BMS1P22-201ENST00000414726 313 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AL590556.1-201ENST00000423231 483 ntBASIC2.71□□□□□ -1.98
RAE1P78406 EIF4EP4-201ENST00000424916 578 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AL358176.2-201ENST00000425769 204 ntBASIC2.71□□□□□ -1.98
RAE1P78406 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
RAE1P78406 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
RAE1P78406 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.71□□□□□ -1.98
RAE1P78406 RPL21P39-201ENST00000463605 483 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AP000870.1-201ENST00000472927 406 ntBASIC2.71□□□□□ -1.98
RAE1P78406 RPL23AP70-201ENST00000483361 460 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AC087190.1-201ENST00000484462 480 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AC107032.1-201ENST00000485945 480 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AC132942.1-201ENST00000486753 483 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AC093591.1-201ENST00000491435 481 ntBASIC2.71□□□□□ -1.98
RAE1P78406 RPL21P16-201ENST00000495531 483 ntBASIC2.71□□□□□ -1.98
RAE1P78406 SLC25A15P5-201ENST00000508033 253 ntBASIC2.71□□□□□ -1.98
RAE1P78406 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.71□□□□□ -1.98
RAE1P78406 AP002404.1-201ENST00000532005 451 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AL442163.3-201ENST00000554110 156 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AL117187.1-201ENST00000555482 181 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.71□□□□□ -1.98
RAE1P78406 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.71□□□□□ -1.98
RAE1P78406 MIR3923-201ENST00000579521 83 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AC124312.5-201ENST00000604451 268 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AC096577.2-201ENST00000611455 153 ntBASIC2.71□□□□□ -1.98
RAE1P78406 AL078596.1-201ENST00000624856 447 ntBASIC2.71□□□□□ -1.98
RAE1P78406 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
RAE1P78406 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
RAE1P78406 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.71□□□□□ -1.98
RAE1P78406 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RAE1P78406 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.7□□□□□ -1.98
RAE1P78406 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.7□□□□□ -1.98
RAE1P78406 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RAE1P78406 Y_RNA.153-201ENST00000363615 91 ntBASIC2.7□□□□□ -1.98
RAE1P78406 RNU6-450P-201ENST00000364654 107 ntBASIC2.7□□□□□ -1.98
RAE1P78406 Y_RNA.557-201ENST00000384680 107 ntBASIC2.7□□□□□ -1.98
RAE1P78406 UBA52P6-201ENST00000399822 382 ntBASIC2.7□□□□□ -1.98
RAE1P78406 AL356057.3-201ENST00000402607 340 ntBASIC2.7□□□□□ -1.98
RAE1P78406 RNA5SP201-201ENST00000410316 124 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms