Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RPL22P18-201ENST00000417197 377 ntBASIC0□□□□□ -2.41
RPS28P62857 AL353718.1-201ENST00000451028 517 ntBASIC0□□□□□ -2.41
RPS28P62857 AC245047.8-201ENST00000456455 284 ntBASIC0□□□□□ -2.41
RPS28P62857 RNU6-498P-201ENST00000459468 107 ntBASIC0□□□□□ -2.41
RPS28P62857 MTND5P16-201ENST00000460269 1703 ntBASIC0□□□□□ -2.41
RPS28P62857 AF131216.2-201ENST00000512316 564 ntBASIC0□□□□□ -2.41
RPS28P62857 AC108043.1-201ENST00000512696 574 ntBASIC0□□□□□ -2.41
RPS28P62857 DEFB108E-201ENST00000524692 240 ntBASIC0□□□□□ -2.41
RPS28P62857 AP000873.5-201ENST00000533906 236 ntBASIC0□□□□□ -2.41
RPS28P62857 AC090049.2-201ENST00000550377 109 ntBASIC0□□□□□ -2.41
RPS28P62857 EIF4A1P12-201ENST00000551910 141 ntBASIC0□□□□□ -2.41
RPS28P62857 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0□□□□□ -2.41
RPS28P62857 CYP3A137P-201ENST00000562436 69 ntBASIC0□□□□□ -2.41
RPS28P62857 MIR4778-201ENST00000577635 80 ntBASIC0□□□□□ -2.41
RPS28P62857 Z98751.3-201ENST00000604447 521 ntBASIC0□□□□□ -2.41
RPS28P62857 PCGEM1.1-201ENST00000613431 131 ntBASIC0□□□□□ -2.41
RPS28P62857 RNU6-199P-201ENST00000362954 107 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 RNA5SP499-201ENST00000363982 119 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 RNU6-960P-201ENST00000364056 120 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 MIR660-201ENST00000385235 97 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC-0.01□□□□□ -2.41
RPS28P62857 AL356583.2-201ENST00000426536 280 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 TIMM9P3-201ENST00000428659 274 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.01□□□□□ -2.41
RPS28P62857 AC092473.1-201ENST00000441098 221 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.01□□□□□ -2.41
RPS28P62857 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.01□□□□□ -2.41
RPS28P62857 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.01□□□□□ -2.41
RPS28P62857 AK3P2-201ENST00000507976 429 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 AC112206.4-201ENST00000515142 405 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.01□□□□□ -2.41
RPS28P62857 SNORA31.10-201ENST00000516482 106 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 AC243829.3-201ENST00000622177 108 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 AC241585.2-209ENST00000638217 143 ntBASIC-0.01□□□□□ -2.41
RPS28P62857 RNU6-545P-201ENST00000362681 104 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 SNORD44.1-201ENST00000363202 61 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 RNU6-105P-201ENST00000363909 104 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 RNU6-43P-201ENST00000384302 107 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 MIR653-201ENST00000385279 96 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC-0.02□□□□□ -2.41
RPS28P62857 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC-0.02□□□□□ -2.41
RPS28P62857 OOSP1P1-201ENST00000423265 274 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.02□□□□□ -2.41
RPS28P62857 AC098934.3-201ENST00000430450 190 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 AC067940.1-201ENST00000458411 300 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 AC087854.1-201ENST00000519706 414 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC-0.02□□□□□ -2.41
RPS28P62857 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC-0.02□□□□□ -2.41
RPS28P62857 ADI1P3-201ENST00000549509 470 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.02□□□□□ -2.41
RPS28P62857 MIR4431-201ENST00000579990 94 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 MIR4753-201ENST00000585119 83 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 AL136317.1-201ENST00000612653 226 ntBASIC-0.02□□□□□ -2.41
RPS28P62857 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC-0.02□□□□□ -2.41
RPS28P62857 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
RPS28P62857 MIR373-201ENST00000362273 69 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 RNU6-53P-201ENST00000365367 106 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 RNU4-48P-201ENST00000365559 182 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 RNU6-417P-201ENST00000384712 107 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 SNORA11.2-201ENST00000408318 127 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AC010975.2-201ENST00000427781 588 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AL606517.2-201ENST00000442855 241 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AL049829.1-201ENST00000465411 156 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 RNU2-10P-201ENST00000516375 211 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AC027419.1-201ENST00000522976 328 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AC023827.1-201ENST00000569247 97 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 BNIP3P33-201ENST00000598912 569 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AL390123.1-201ENST00000603216 237 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AC064872.1-201ENST00000604823 1072 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 LARP7P1-201ENST00000605576 316 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AC073349.3-201ENST00000617616 186 ntBASIC-0.03□□□□□ -2.41
RPS28P62857 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.03□□□□□ -2.41
RPS28P62857 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.04□□□□□ -2.42
RPS28P62857 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
RPS28P62857 MIR208A-201ENST00000362287 71 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 RNU6-462P-201ENST00000362659 105 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 RNU4-45P-201ENST00000365469 141 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 MIR300-201ENST00000401138 83 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 SNORA11.1-201ENST00000408133 129 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 MIR1253-201ENST00000408273 105 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 MIR1289-2-201ENST00000408360 111 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 RNA5SP504-201ENST00000410676 117 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.04□□□□□ -2.42
RPS28P62857 RPL23AP50-201ENST00000434149 455 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AL117351.1-201ENST00000438864 766 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.04□□□□□ -2.42
RPS28P62857 AC243964.1-201ENST00000441814 261 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.04□□□□□ -2.42
RPS28P62857 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC-0.04□□□□□ -2.42
RPS28P62857 AL513124.1-201ENST00000450410 614 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 MTND2P3-201ENST00000452458 470 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 SNRPFP3-201ENST00000457792 225 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 snoU13.15-201ENST00000459407 104 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
RPS28P62857 AC106038.2-201ENST00000520706 568 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms