Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NBR2-204ENST00000587322 63 ntBASIC1.86□□□□□ -2.11
SRP54P61011 AC078795.3-201ENST00000602913 472 ntBASIC1.86□□□□□ -2.11
SRP54P61011 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.86□□□□□ -2.11
SRP54P61011 RMST_6.1-201ENST00000611980 203 ntBASIC1.86□□□□□ -2.11
SRP54P61011 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
SRP54P61011 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SRP54P61011 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SRP54P61011 MTND5P26-201ENST00000426018 1752 ntBASIC1.85□□□□□ -2.11
SRP54P61011 U3.9-201ENST00000363823 204 ntBASIC1.85□□□□□ -2.11
SRP54P61011 POLHP1-201ENST00000411806 470 ntBASIC1.85□□□□□ -2.11
SRP54P61011 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.85□□□□□ -2.11
SRP54P61011 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.85□□□□□ -2.11
SRP54P61011 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
SRP54P61011 TPTE2P5-203ENST00000458118 728 ntBASIC1.85□□□□□ -2.11
SRP54P61011 AC104564.1-201ENST00000493028 407 ntBASIC1.85□□□□□ -2.11
SRP54P61011 AC091885.1-201ENST00000506658 268 ntBASIC1.85□□□□□ -2.11
SRP54P61011 AC005741.1-201ENST00000511094 432 ntBASIC1.85□□□□□ -2.11
SRP54P61011 RNA5SP401-201ENST00000515920 127 ntBASIC1.85□□□□□ -2.11
SRP54P61011 AP005660.1-201ENST00000522972 293 ntBASIC1.85□□□□□ -2.11
SRP54P61011 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.85□□□□□ -2.11
SRP54P61011 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.85□□□□□ -2.11
SRP54P61011 PIGPP4-201ENST00000584447 307 ntBASIC1.85□□□□□ -2.11
SRP54P61011 BNIP3P25-201ENST00000596023 559 ntBASIC1.85□□□□□ -2.11
SRP54P61011 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.85□□□□□ -2.11
SRP54P61011 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SRP54P61011 AL450472.1-202ENST00000637286 180 ntBASIC1.85□□□□□ -2.11
SRP54P61011 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SRP54P61011 AC233981.2-201ENST00000611524 1614 ntBASIC1.84□□□□□ -2.11
SRP54P61011 Y_RNA.332-201ENST00000365271 113 ntBASIC1.84□□□□□ -2.11
SRP54P61011 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
SRP54P61011 Y_RNA.504-201ENST00000384481 104 ntBASIC1.84□□□□□ -2.11
SRP54P61011 AL033519.2-201ENST00000403958 392 ntBASIC1.84□□□□□ -2.11
SRP54P61011 AL356432.1-201ENST00000405809 419 ntBASIC1.84□□□□□ -2.11
SRP54P61011 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.84□□□□□ -2.11
SRP54P61011 AL035666.1-201ENST00000446195 348 ntBASIC1.84□□□□□ -2.11
SRP54P61011 HMGN2P18-201ENST00000450680 270 ntBASIC1.84□□□□□ -2.11
SRP54P61011 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.84□□□□□ -2.11
SRP54P61011 AC091874.1-201ENST00000511402 339 ntBASIC1.84□□□□□ -2.11
SRP54P61011 MIR449C-201ENST00000516047 92 ntBASIC1.84□□□□□ -2.11
SRP54P61011 AC087854.1-201ENST00000519706 414 ntBASIC1.84□□□□□ -2.11
SRP54P61011 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
SRP54P61011 CYP4A27P-201ENST00000567218 190 ntBASIC1.84□□□□□ -2.11
SRP54P61011 MTND1P15-201ENST00000579262 949 ntBASIC1.84□□□□□ -2.11
SRP54P61011 AP005136.1-201ENST00000579765 429 ntBASIC1.84□□□□□ -2.11
SRP54P61011 Z98751.3-201ENST00000604447 521 ntBASIC1.84□□□□□ -2.11
SRP54P61011 PCGEM1.1-201ENST00000613431 131 ntBASIC1.84□□□□□ -2.11
SRP54P61011 AL136221.1-201ENST00000621449 509 ntBASIC1.84□□□□□ -2.11
SRP54P61011 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
SRP54P61011 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
SRP54P61011 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SRP54P61011 ZNF72P-201ENST00000425869 1908 ntBASIC1.83□□□□□ -2.12
SRP54P61011 Y_RNA.51-201ENST00000362725 102 ntBASIC1.83□□□□□ -2.12
SRP54P61011 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
SRP54P61011 RNU6-259P-201ENST00000383999 107 ntBASIC1.83□□□□□ -2.12
SRP54P61011 RNU6-38P-201ENST00000384085 107 ntBASIC1.83□□□□□ -2.12
SRP54P61011 SNORD116-2-201ENST00000384274 95 ntBASIC1.83□□□□□ -2.12
SRP54P61011 SNORD116-6-201ENST00000384711 96 ntBASIC1.83□□□□□ -2.12
SRP54P61011 SNORD73A-201ENST00000386062 65 ntBASIC1.83□□□□□ -2.12
SRP54P61011 RNU2-66P-201ENST00000410650 161 ntBASIC1.83□□□□□ -2.12
SRP54P61011 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
SRP54P61011 ARL5AP1-201ENST00000418991 388 ntBASIC1.83□□□□□ -2.12
SRP54P61011 RNU6-1037P-201ENST00000459571 107 ntBASIC1.83□□□□□ -2.12
SRP54P61011 Y_RNA.654-201ENST00000497848 106 ntBASIC1.83□□□□□ -2.12
SRP54P61011 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.83□□□□□ -2.12
SRP54P61011 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.83□□□□□ -2.12
SRP54P61011 RNU6-1069P-201ENST00000516612 133 ntBASIC1.83□□□□□ -2.12
SRP54P61011 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.83□□□□□ -2.12
SRP54P61011 AC087441.2-201ENST00000529141 262 ntBASIC1.83□□□□□ -2.12
SRP54P61011 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.83□□□□□ -2.12
SRP54P61011 EIF4A1P12-201ENST00000551910 141 ntBASIC1.83□□□□□ -2.12
SRP54P61011 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.83□□□□□ -2.12
SRP54P61011 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.83□□□□□ -2.12
SRP54P61011 AC109446.1-201ENST00000566172 220 ntBASIC1.83□□□□□ -2.12
SRP54P61011 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
SRP54P61011 AC092747.3-201ENST00000603769 301 ntBASIC1.83□□□□□ -2.12
SRP54P61011 AC005520.5-201ENST00000613926 164 ntBASIC1.83□□□□□ -2.12
SRP54P61011 SNORA43.4-201ENST00000629559 138 ntBASIC1.83□□□□□ -2.12
SRP54P61011 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SRP54P61011 CBX3P1-201ENST00000325243 554 ntBASIC1.82□□□□□ -2.12
SRP54P61011 RNU6-1085P-201ENST00000363576 107 ntBASIC1.82□□□□□ -2.12
SRP54P61011 SNORA69-201ENST00000383895 132 ntBASIC1.82□□□□□ -2.12
SRP54P61011 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.82□□□□□ -2.12
SRP54P61011 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.82□□□□□ -2.12
SRP54P61011 MTND1P29-201ENST00000448112 647 ntBASIC1.82□□□□□ -2.12
SRP54P61011 AC107393.1-201ENST00000512403 346 ntBASIC1.82□□□□□ -2.12
SRP54P61011 AC016256.1-201ENST00000547971 354 ntBASIC1.82□□□□□ -2.12
SRP54P61011 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.82□□□□□ -2.12
SRP54P61011 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.82□□□□□ -2.12
SRP54P61011 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
SRP54P61011 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
SRP54P61011 RPL17P51-201ENST00000605218 238 ntBASIC1.82□□□□□ -2.12
SRP54P61011 AC068944.2-201ENST00000610373 403 ntBASIC1.82□□□□□ -2.12
SRP54P61011 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.82□□□□□ -2.12
SRP54P61011 MIR6863-201ENST00000636112 90 ntBASIC1.82□□□□□ -2.12
SRP54P61011 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SRP54P61011 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
SRP54P61011 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
SRP54P61011 RNA5SP493-201ENST00000364115 91 ntBASIC1.81□□□□□ -2.12
SRP54P61011 RNU4-66P-201ENST00000365199 138 ntBASIC1.81□□□□□ -2.12
SRP54P61011 MIR9-3-201ENST00000385084 90 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms