Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.05□□□□□ -2.08
PEX3P56589 AL356157.2-201ENST00000605122 111 ntBASIC2.05□□□□□ -2.08
PEX3P56589 AL138963.2-201ENST00000605137 226 ntBASIC2.05□□□□□ -2.08
PEX3P56589 AC007792.1-201ENST00000623023 402 ntBASIC2.05□□□□□ -2.08
PEX3P56589 SNORA43.4-201ENST00000629559 138 ntBASIC2.05□□□□□ -2.08
PEX3P56589 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PEX3P56589 AP000560.1-201ENST00000624150 1937 ntBASIC2.05□□□□□ -2.08
PEX3P56589 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
PEX3P56589 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PEX3P56589 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
PEX3P56589 SNORA38-201ENST00000363946 132 ntBASIC2.04□□□□□ -2.08
PEX3P56589 Y_RNA.212-201ENST00000364177 102 ntBASIC2.04□□□□□ -2.08
PEX3P56589 RNU6-1283P-201ENST00000365314 105 ntBASIC2.04□□□□□ -2.08
PEX3P56589 RNU6-831P-201ENST00000384548 107 ntBASIC2.04□□□□□ -2.08
PEX3P56589 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PEX3P56589 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PEX3P56589 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.04□□□□□ -2.08
PEX3P56589 MTND1P2-201ENST00000430604 821 ntBASIC2.04□□□□□ -2.08
PEX3P56589 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.04□□□□□ -2.08
PEX3P56589 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.04□□□□□ -2.08
PEX3P56589 AC012308.1-201ENST00000451232 178 ntBASIC2.04□□□□□ -2.08
PEX3P56589 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.04□□□□□ -2.08
PEX3P56589 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.04□□□□□ -2.08
PEX3P56589 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PEX3P56589 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.04□□□□□ -2.08
PEX3P56589 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.04□□□□□ -2.08
PEX3P56589 AC140059.1-201ENST00000489238 361 ntBASIC2.04□□□□□ -2.08
PEX3P56589 MTCO2P30-201ENST00000503662 364 ntBASIC2.04□□□□□ -2.08
PEX3P56589 AC091874.1-201ENST00000511402 339 ntBASIC2.04□□□□□ -2.08
PEX3P56589 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
PEX3P56589 RNU5F-2P-201ENST00000516066 82 ntBASIC2.04□□□□□ -2.08
PEX3P56589 RNU6-1332P-201ENST00000516666 104 ntBASIC2.04□□□□□ -2.08
PEX3P56589 RNU6-256P-201ENST00000516747 97 ntBASIC2.04□□□□□ -2.08
PEX3P56589 SNORA48.11-201ENST00000517015 89 ntBASIC2.04□□□□□ -2.08
PEX3P56589 AF235103.2-201ENST00000525753 346 ntBASIC2.04□□□□□ -2.08
PEX3P56589 CBX3P7-201ENST00000532876 502 ntBASIC2.04□□□□□ -2.08
PEX3P56589 AP000763.2-201ENST00000540641 163 ntBASIC2.04□□□□□ -2.08
PEX3P56589 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.04□□□□□ -2.08
PEX3P56589 MIR6845-201ENST00000613182 61 ntBASIC2.04□□□□□ -2.08
PEX3P56589 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
PEX3P56589 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PEX3P56589 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PEX3P56589 RNU6-1252P-201ENST00000363054 104 ntBASIC2.03□□□□□ -2.08
PEX3P56589 AL133396.1-201ENST00000432048 687 ntBASIC2.03□□□□□ -2.08
PEX3P56589 RPS15AP10-201ENST00000432472 382 ntBASIC2.03□□□□□ -2.08
PEX3P56589 MTATP6P13-201ENST00000438531 667 ntBASIC2.03□□□□□ -2.08
PEX3P56589 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.03□□□□□ -2.08
PEX3P56589 MTND1P11-201ENST00000456661 876 ntBASIC2.03□□□□□ -2.08
PEX3P56589 AMD1P1-201ENST00000457220 922 ntBASIC2.03□□□□□ -2.08
PEX3P56589 RNU6-1037P-201ENST00000459571 107 ntBASIC2.03□□□□□ -2.08
PEX3P56589 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.03□□□□□ -2.08
PEX3P56589 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.08
PEX3P56589 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.03□□□□□ -2.08
PEX3P56589 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.03□□□□□ -2.08
PEX3P56589 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
PEX3P56589 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
PEX3P56589 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.03□□□□□ -2.08
PEX3P56589 AC018889.1-201ENST00000605372 397 ntBASIC2.03□□□□□ -2.08
PEX3P56589 AL449363.1-201ENST00000617815 186 ntBASIC2.03□□□□□ -2.08
PEX3P56589 U4atac.1-201ENST00000618345 95 ntBASIC2.03□□□□□ -2.08
PEX3P56589 AC100810.6-201ENST00000638068 285 ntBASIC2.03□□□□□ -2.08
PEX3P56589 RNU6-212P-201ENST00000362642 104 ntBASIC2.02□□□□□ -2.09
PEX3P56589 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PEX3P56589 RNU6-214P-201ENST00000384130 107 ntBASIC2.02□□□□□ -2.09
PEX3P56589 RNU6-95P-201ENST00000384697 107 ntBASIC2.02□□□□□ -2.09
PEX3P56589 AL591034.2-201ENST00000402839 359 ntBASIC2.02□□□□□ -2.09
PEX3P56589 FGF7P8-201ENST00000402994 292 ntBASIC2.02□□□□□ -2.09
PEX3P56589 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.02□□□□□ -2.09
PEX3P56589 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
PEX3P56589 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.02□□□□□ -2.09
PEX3P56589 AC018868.1-201ENST00000491307 315 ntBASIC2.02□□□□□ -2.09
PEX3P56589 RPL23AP63-201ENST00000498752 471 ntBASIC2.02□□□□□ -2.09
PEX3P56589 PTP4A1P4-201ENST00000512479 322 ntBASIC2.02□□□□□ -2.09
PEX3P56589 RNU6-612P-201ENST00000516909 102 ntBASIC2.02□□□□□ -2.09
PEX3P56589 RN7SKP256-201ENST00000517201 314 ntBASIC2.02□□□□□ -2.09
PEX3P56589 AC107953.1-201ENST00000522216 297 ntBASIC2.02□□□□□ -2.09
PEX3P56589 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.02□□□□□ -2.09
PEX3P56589 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.02□□□□□ -2.09
PEX3P56589 AL133215.3-201ENST00000609801 448 ntBASIC2.02□□□□□ -2.09
PEX3P56589 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.02□□□□□ -2.09
PEX3P56589 DUXAP9-208ENST00000622815 614 ntBASIC2.02□□□□□ -2.09
PEX3P56589 AC091932.3-201ENST00000624223 323 ntBASIC2.02□□□□□ -2.09
PEX3P56589 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
PEX3P56589 Y_RNA.86-201ENST00000363020 111 ntBASIC2.01□□□□□ -2.09
PEX3P56589 RNU1-23P-201ENST00000363361 144 ntBASIC2.01□□□□□ -2.09
PEX3P56589 RNU6-1317P-201ENST00000364582 104 ntBASIC2.01□□□□□ -2.09
PEX3P56589 SNORA16.1-201ENST00000364597 132 ntBASIC2.01□□□□□ -2.09
PEX3P56589 RNU6-1032P-201ENST00000384100 107 ntBASIC2.01□□□□□ -2.09
PEX3P56589 RNU6-1274P-201ENST00000384557 107 ntBASIC2.01□□□□□ -2.09
PEX3P56589 MIR9-3-201ENST00000385084 90 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AL356776.1-201ENST00000406574 447 ntBASIC2.01□□□□□ -2.09
PEX3P56589 RNU2-48P-201ENST00000410694 191 ntBASIC2.01□□□□□ -2.09
PEX3P56589 RNU6-1245P-201ENST00000411130 106 ntBASIC2.01□□□□□ -2.09
PEX3P56589 RNU6-325P-201ENST00000411132 105 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AL590632.1-201ENST00000424289 371 ntBASIC2.01□□□□□ -2.09
PEX3P56589 MTCO3P46-201ENST00000425787 232 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AL645568.3-201ENST00000433683 316 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.01□□□□□ -2.09
PEX3P56589 AL161788.1-201ENST00000441805 169 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms